Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi28g00012 ATGGCAACATTTAAAGTTCATGGAACCCCCTTGTCACCAGCTTGTATGCGAGTCACTGCTACCCTCTATGAGAAACAGATTGAATTTGAGTTTGTTCCCATTGACATGAGAAATGGTGAACACAAAAAGGAACCCTTCCTTTCCCTTAATCCATTTGGTCAAGTTCCAGGGTTTGAAGATGGAGATTTGAAGCTCTTTGAATCAAGGGCAATAACGAAATATATTGCTCATGAGTATGCTGATAAGGGGACAGAGCTGATAAGCAGGGACTCCAAGAAGATGGCGATAACAAGTGTGTGGTTGGAAGTGGAGAGCCAACAATTCGATCAACCAGCTTCAAAACTTTTGTGGGAGTTAGTGTTTAAGCCTATGTTTGGGATTCCCACAGATCCTGCAGCTGTGGAAGAGAATGAAGCCAAACTGAGTACTGTTCTTAGTATCTATGAGAAAAGATTGTCTGAGTCCAAATACTTGGCAGGTGAGTGTTTCACCTTGGCGGATCTGCATCACCTTCCTGCTATTAATTTCTTGATGAACTCACCAGTCAAGAAGCTGATTGAATCAAGACCCCATGTTAGTGCATGGGTTGCTGATATTACAGCAAGACCAGCTTGGTCTAAGGTCCTTGCCATGCTACCTAAGCAGTAA 648 0.4306 MATFKVHGTPLSPACMRVTATLYEKQIEFEFVPIDMRNGEHKKEPFLSLNPFGQVPGFEDGDLKLFESRAITKYIAHEYADKGTELISRDSKKMAITSVWLEVESQQFDQPASKLLWELVFKPMFGIPTDPAAVEENEAKLSTVLSIYEKRLSESKYLAGECFTLADLHHLPAINFLMNSPVKKLIESRPHVSAWVADITARPAWSKVLAMLPKQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi28g00012 215 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Sebi28g00012 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 215 IPR010987 -
Sebi28g00012 215 FunFam Glutathione S-transferase F2 88 209 - -
Sebi28g00012 215 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Sebi28g00012 215 CDD GST_N_Phi 3 77 - -
Sebi28g00012 215 Gene3D - 90 214 - -
Sebi28g00012 215 Pfam Glutathione S-transferase, C-terminal domain 112 203 IPR004046 -
Sebi28g00012 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 4 211 - -
Sebi28g00012 215 CDD GST_C_Phi 92 209 IPR034347 -
Sebi28g00012 215 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Sebi28g00012 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Sebi28g00012 215 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
Sebi28g00012 215 FunFam Glutathione S-transferase F2 3 87 - -
Sebi28g00012 215 SFLD Main.5: Phi-like 1 211 - -
Sebi28g00012 215 Gene3D Glutaredoxin 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi28g00012 Sebi-Chr28 196596 197443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi28g00012 6 211 Glutathione S-transferase Gene Family AT2G47730 62.319 5.15e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi28g00012 K00799 - gmx:100799868 342.813