Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi289g00033 ATGGTCTTGTGTGTTGAGGTTAAGGATTTCTATCCAGAAGAAAGAGATGCTTTGTTGCTCACAAGGGATTCTTTAAATTCTTCTCTCAATTTGCATGGGAATTGGACAGGACCTCCTTGTATAGACAATCAGAGTAGATGGTTTGGTATAACTTGTTCCAATTGGCATGTTGTTCACATTGTCCTTCATGGAGTTAATCTTAGTGGTTATTTACCTCCTACATCCTTTCAAAATATAACTTTCTTGAGGCTACTTGACTTTAGAAACAATGCAGTTTTTGGGCCACTACCAAACCTCACTAGTTTGGTGTTTTTGGAACAAGTCCTATTCTCATCTAATTACTTGTCAGGGTCAATTCCTGTGGAGTATGTTGAACTTCCCAGGCTACAAGTTTTGGAGCTGCAAGAAAACTACATAGATAGTCAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCATACAATCATCTGGTAGGGCCAATTCCTGAAACTTCTGTGCTTCAAAGGTTCCCAAAGAGTTCTTTTGATAATAATTCAGATCTTTGTGGTAAGCCATTGGATAAGTTATGTCCTGATGAACCTCCTGCCCCATCTCCAGCTCCATTTCCGGTTGTTGTTCCTCCAAGCCCTGCAGTGGAAAAAATTAAGAAGAGACTTCAAATATGGATTATTGCTTTGATTGCTACTTCAGTTGTACTCTTTCTTTTTATGATCATTATTATTGCCTTCTTGTTTTCTAGAAAACAAACAAGTGGAAAAGAAAAAAGAAGAAATGATTCAGCTGGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTGTCTTATCCAGGGAAGAGTGATGATTCAGAAAGATTAGGCAGATTGGAATTTTCCAACAAGAAATTTCCAGTTTTTGACATGGATGATTTATTAAGGGCATCAGCAGAAGTTCTAGGAAGAGGGAATTTAGGTGTTACATACAAAGCAACACTTGAAACTGGTACTGTTGTTGCAGTGAAGAGACTTAGCTACATGAATGAATTGAGCAGGAAGGAATTTCTCCATCAGATGCAAATGCTAGGTCAGATAAAGCATGAAAATCTAGTAGAAATTGTCTCCTTTTATTATTCAGAAGAGCAAAAGCTGGTCATATATGAACTAGTCCCTGATGGCACTTTGTTTGAGCTCCTACATGAGGGCAGAGGAGTTGGAAGAATGCCTCTTGATTGGACCACAAGACTGGCTATTATCAAAGACATAGCAAAGGGTCTTGCCTTCCTTCATAATTCTTTGTCTTCTCATAAGGTTCCTCATGCCAACCTCAAATCATCCAATGTCCTAATTCATCAAGATAGCCAAGGTTACCATTCCAAGCTCACAGACTATGGCTTCTTGCCTCTACTCCCAGCTAAAAAAGATGCAGAAAAGCTAGCCATAAGCAAGTCACCAGAATTTGTTAAAGGGAAGAAGCTGACACACAAAGCTGATGTCTATTGCTTTGGTATCATTATGTTAGAAATTATAACTGGCAAAATTCCTGGTCAAATGTTAGGTGAAGTTGAAGAAACGACCAATGATCTTTCAGATTGGGTAAGGACAGTGGTGAACAATGATTGGTCCACTGATATACTTGATTTGGAAATACTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAATTTGACAGAGTTAGCTCTGGAGTGTACAGATATGACACCAGAGAAGCGACCTAAAATGAGTGTAGTGTTGAGAAGAATAGAAGAGATAGAGCAAATGAAACCAGAAAATGATTGA 1785 0.386 MVLCVEVKDFYPEERDALLLTRDSLNSSLNLHGNWTGPPCIDNQSRWFGITCSNWHVVHIVLHGVNLSGYLPPTSFQNITFLRLLDFRNNAVFGPLPNLTSLVFLEQVLFSSNYLSGSIPVEYVELPRLQVLELQENYIDSQIPPFDQPSLTSFNVSYNHLVGPIPETSVLQRFPKSSFDNNSDLCGKPLDKLCPDEPPAPSPAPFPVVVPPSPAVEKIKKRLQIWIIALIATSVVLFLFMIIIIAFLFSRKQTSGKEKRRNDSAGYVFGAWAKKMVSYPGKSDDSERLGRLEFSNKKFPVFDMDDLLRASAEVLGRGNLGVTYKATLETGTVVAVKRLSYMNELSRKEFLHQMQMLGQIKHENLVEIVSFYYSEEQKLVIYELVPDGTLFELLHEGRGVGRMPLDWTTRLAIIKDIAKGLAFLHNSLSSHKVPHANLKSSNVLIHQDSQGYHSKLTDYGFLPLLPAKKDAEKLAISKSPEFVKGKKLTHKADVYCFGIIMLEIITGKIPGQMLGEVEETTNDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLNLTELALECTDMTPEKRPKMSVVLRRIEEIEQMKPEND 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi289g00033 594 Gene3D Phosphorylase Kinase; domain 1 278 384 - -
Sebi289g00033 594 SUPERFAMILY L domain-like 12 177 - -
Sebi289g00033 594 Gene3D Ribonuclease Inhibitor 11 196 IPR032675 -
Sebi289g00033 594 ProSiteProfiles Protein kinase domain profile. 309 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi289g00033 594 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 589 IPR046959 -
Sebi289g00033 594 SUPERFAMILY Protein kinase-like (PK-like) 313 584 IPR011009 -
Sebi289g00033 594 Pfam Leucine rich repeat N-terminal domain 13 53 IPR013210 -
Sebi289g00033 594 Gene3D Transferase(Phosphotransferase) domain 1 385 594 - -
Sebi289g00033 594 Pfam Protein kinase domain 312 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi289g00033 Sebi-Chr289 1188596 1190802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi289g00033 34 594 Receptor kinase-like Gene Family AT1G68400 34.641 2.25e-108 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi289g00033 Pkinase 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi289g00033 - - gmx:102668068 941.028