Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi289g00024 ATGAGAAACTCTGAAGCAAGTCAAGTGGCTATGGAGATTGAAGCAAGCAAGCCTTCAGGGAATGGGGCAATCCTGCCAGGGTTGAGTCCTCTGAGTGAGACACTTTGGAGGGAGAAAGCACAAACAGAGTTCATTGGAGATGTCTCAGCAAGGCTCACATGGAAGGATCTGACTGTGATGGTTACTCTTAGCAATGGAGAGACTCAAAATGTTTTGGAGGGTCTAACTGGTTATGCTGAACCTGGTAACTTCACTGCTCTAATGGGTCCTTCAGGTTCAGGAAAATCTACCCTTCTTGATGCCCTTTCTAGTCGCCTAGCAGCAAATGCTTTTCTTTCAGGCACCATACTCCTCAATGGTCGCAAAGCCAAACTCTCTTTTGGCACTGCAGCTTATGTGACACAAGATGACAACTTAATTGGTACATTAACTGTACGAGAAACAATTTCATATTCAGCTCGTTTGCGTTTGCCTGATAAGATGTCAAGGTCTGATAAGAGAGCTCTTGTTGAGAGCACCATTGTTGCAATGGGTCTTCAGGATTGTGCTGACACAGTGATTGGGAATTGGCACTTGCGTGGGATAAGTGGTGGAGAAAAGAGAAGGGTTAGCATTGCTTTGGAAATCTTGATGAGGCCAAGATTACTTTTCCTTGATGAACCAACCAGTGGTCTTGACAGGTTGTTAGATATCACTATTTGTGCATTTATTGTTCTTGTCCAAAGTGTTTGCATCAAACATTGCAGGGATCCCACTGCTTCGGCTTTCTTTGTGACTCAGACACTACGTGCCTTGGCAAGGGATGGAAGAACAGTGATAGCTTCAATTCATCAACCTAGCAGTGAAGTGTTTGAGCTATTTGACCAATTGTACTTGCTTTCTGGTGGTAAAACTGTTTATTTTGGCCAAGCTTCAGATGCATATGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCTTTGAGGAACCCCTCTGATCATTTCCTTAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACCCTTAAAGGGTCCATGAAACTAAGGTTTGAGGGAAGTGAGGATCCCCTGGACAAGATCACTACTGCTGAAGCTATCAGAACTCTCATTGACTACTACCGCACTTCTCAGCACTCTTATGCTGCAAGACAAAAAGTGGATGATATATCCAGAGTTAAGGGAACAGTGCTTGAAGCAGGAGGAAGTGAGGCTAGTTTCTTGATGCAATCTTACACCTTAACCAAGCGCTCATTCATTAATATGTCAAGGGATTTTGGTTATTACTGGCTTAGGCTTGTAATCTACATTGTGGTCACTATCTGCATTGGAACCATTTATTTGAACGTGGGGACAAGCTACAACTCAATTCTGGCTAGGGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGATATGAAGGTTTTCCAACGGGAGAGGCTTAATGGGCACTATGGTGTCACTGCATTTGTAATCAGTAACACATTATCTGCAATGCCATTCCTTATATTGATCACCTTTCTCTCTGGAACAATTTGTTACTTCATGGTTCGCCTACACCCTGGCTTTTGGCATTACCTGTTCTTTGTTTTGTGTCTTTATGCTAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGTATTGTCCCCAACTTTCTCATGGGGATCATAATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTTCCACATGACATCCCAAAGCCAGTATGGCGCTATCCAATGTCATATATCAGTTTCCACTTCTGGGCATTACAGGGACAATACCAGAATGATCTTAAAGGCTTGATATTTGACAACCAGACACCAGAACTTCCAAAGATACCAGGAGAATACATCCTTGAGAATGTGTTCCAGATTGATGTCAGCAGATCAAAGTGGGTAGATTTAAGTGTAATCTTAAGCATGATTGTCATCTACCGCATATTTTTCTTCTTCATGATCAAAATCAATGAGGATGTGACCCCTTGGGTCAGAGGGTATCTAGCTAGGAGAAGAATGCAGCAGAAGAGTGGAGCCCAGAATACTACTATTGCACCTGATGTCCTCACTCAGTCCCCATCTCTGAGAAACTACATTTCCACTCAAACAAGAAATGGTACTTCCAGAAACAACAATGAATCTTCTTGA 2214 0.4291 MRNSEASQVAMEIEASKPSGNGAILPGLSPLSETLWREKAQTEFIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGNFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMSRSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDRLLDITICAFIVLVQSVCIKHCRDPTASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASDAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSEDPLDKITTAEAIRTLIDYYRTSQHSYAARQKVDDISRVKGTVLEAGGSEASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTSYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPELPKIPGEYILENVFQIDVSRSKWVDLSVILSMIVIYRIFFFFMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRNYISTQTRNGTSRNNNESS 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi289g00024 737 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 252 698 - -
Sebi289g00024 737 Pfam ABC transporter 74 223 IPR003439 GO:0005524
Sebi289g00024 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 304 IPR027417 -
Sebi289g00024 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 320 IPR003439 GO:0005524
Sebi289g00024 737 SMART AAA_5 81 277 IPR003593 GO:0016887
Sebi289g00024 737 CDD ABCG_EPDR 49 302 - -
Sebi289g00024 737 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Sebi289g00024 737 Pfam ABC-2 type transporter 410 616 IPR013525 GO:0016020|GO:0140359
Sebi289g00024 737 Gene3D - 46 315 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi289g00024 Sebi-Chr289 832566 837876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi289g00024 82 247 Calmodulin-binding Proteins AT2G36910 32.044 5.18e-10 61.2