Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi288g00013 ATGTTAGCCATGCTAGGTCCATCTGGCAGTGGCAAAACAACTCTGCTAACAGCATTGGGAGGGAGGCTTGGAGGGAAACTTTATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATTCAATGAAAAGGAACACTGGCTTTGTTACCCAAGATGATGTTCTTTACCCTCACTTGACTGTGACTGAGACACTAGTGTTCACTGCACTTCTCAGATTGCCCAATAGTGTTACTAAAGAAAAGAAAATTGGGCATGCAAAAGCTGTTATAGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATTGTTGGAAGCCCACATCTGAGAGGAGTGTCTGGTGGAGAGAGAAAAAGGGTTAGCATTGGACAAGAATTGCTCATAAACCCAAGCTTGTTGTTTTTGGATGAACCAACTTCTGGCCTAGATTCAACCACAGCACAAAGGATTGTCTCAACTTTGTGGGAGTTAGCATGTGGAGGGAGAACTGTTGTGATGACAATACACCAACCTTCAAGTAGGCTATACTACATGTTTCATAAGGTGTTATTGCTAGCAGAAGGAAACCCCTTGTATTTTGGTAAGGGGTCTGAAGCCATTGAATATTTTTCTAATATTGGATATTCCCCAGCAATGGCCATGAACCCTTCAGACTTCCTTTTGGATCTTGCAAACGCATTTAAGAGCAACTTTGCTGCACAATTGAAGTCAGTACATCAAGAAATCAGTGACTCTGATCAAAATCAGGGTAGATTACAAGACACAGGCTCTGAAAAATGGCCTACCAGCTGGTCACAGCAATTCCTTGTATTGTTAAGAAGAGACGTCAAAGAGAGAAAATATGAGTCCTTCTCTGGCCTGCGGATTTTTCAGGTCCTTGTGGTTGCACTTATTTCAGGACTACTGTGGTATAAGTCAGATATTTCACACTTACAGGATCAGATTGGGCTTCTGTTTTTCATATGGCTTTTGGGGTTTTTTCCCTCTCTTTCAAGCAATTTTCACCTTCCCCCAAGAGCTAATGATGATAGAGAAAGAAAGATCTTCTGGAATGTACAGGCTCTCCTCATGCTTCATGTCAAGAATGTGGCACAAGGCTTAGGCCTTGCCCTTGGTGCTGTTAATGTTCCAAGTTTTATAGCATGGGTGAAGTACATCTCCATTAGCTACTACACATACCAGTTATTTATTGGGTCTCAGTATCACACTGGTGAGACATACCCATGTTCTAGTGGCCAGTGTCTAATTGAAGAATTTCCTTCTATAAAGGATATAGGGCTTAGTTTGAACAAGGAAGCCCTGGCTGCTGTAGCTCTGGTGATAATGCTAATAGGTTACAGATTAATAGCTTATTTTGCTCTCATGAGGATTGGGGTGACAAAGAAATTGGCCTAG 1392 0.4181 MLAMLGPSGSGKTTLLTALGGRLGGKLYGSITYNGEAFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEKKIGHAKAVIDQLGLTKCKDSIVGSPHLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTVVMTIHQPSSRLYYMFHKVLLLAEGNPLYFGKGSEAIEYFSNIGYSPAMAMNPSDFLLDLANAFKSNFAAQLKSVHQEISDSDQNQGRLQDTGSEKWPTSWSQQFLVLLRRDVKERKYESFSGLRIFQVLVVALISGLLWYKSDISHLQDQIGLLFFIWLLGFFPSLSSNFHLPPRANDDRERKIFWNVQALLMLHVKNVAQGLGLALGAVNVPSFIAWVKYISISYYTYQLFIGSQYHTGETYPCSSGQCLIEEFPSIKDIGLSLNKEALAAVALVIMLIGYRLIAYFALMRIGVTKKLA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi288g00013 463 Pfam ABC transporter 2 139 IPR003439 GO:0005524
Sebi288g00013 463 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 337 - -
Sebi288g00013 463 FunFam ABC transporter G family member 22 1 205 - -
Sebi288g00013 463 Pfam ABC-2 type transporter 168 225 IPR043926 GO:0140359
Sebi288g00013 463 Pfam ABC-2 type transporter 265 332 IPR013525 GO:0016020|GO:0140359
Sebi288g00013 463 ProSitePatterns ABC transporters family signature. 111 125 IPR017871 GO:0005524|GO:0016887
Sebi288g00013 463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 211 IPR003439 GO:0005524
Sebi288g00013 463 Gene3D - 1 205 IPR027417 -
Sebi288g00013 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 203 IPR027417 -
Sebi288g00013 463 SMART AAA_5 1 188 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi288g00013 Sebi-Chr288 342680 345183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi288g00013 2 250 Calmodulin-binding Proteins AT2G36910 25.869 6.88e-12 66.2