Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi288g00006 ATGAATGTATTTCCGTTTCCGGTGGCTGCAAGATACAAATTATTGGTCAGTTTAGTTCAGAAGACTGAGTTAGCTTTGCTTACGAGTTGGTCACAAGGCTACGCAGGGGCAAAGTTTCGAAAGGGATTTGCAGGCTACACAGGGGCATATTATCAGTGGTGGTCGTTGCTTCCCTGTGCTCACCGTTGCGGACTTGCGGTGATGGAGCAGGGCATGTATTCCGCTGTTTCTGAAGAGCCAACGTGGCAGGGGCTGGAACAAATGTCAGTTTCTCGAGAAGATGCTGGTGAAAGTGATTATGGTGGGGTCTCTAATGAATGGTATGAGGAGGAAGAAGATTTTCACAGTGATGAAGATTCTGATGATGCTACCCAGGAAGGTGTTAAAGTGGTTAACAGTGGTGATGAAATTAAAATCGGCATCAATTGTGAAGAAGACATTAAGAGTCTTGACTTGGTTGAATTTAGCCCTCATATGATTAGGCATTATGATTTTCCAAGTTGTGATATTGCATACCTCTTTTATTCTCTTTATGGTAAATCCAATGGATTTAGTGTTCGTAAAGGTCTTCGGCAGGATAGGGGGTTAAAAATGGAAGATCGGAAGCGTGAGATTAGACCAGAAACTAGATGTAATTGTCGAGCAAATTTCAGAGTACATATTGACATTGTCACTGGCCGCTGGTATGCAACTGTTTTTCTGGATGAGCACACTCATGACTTATTAGATTCGAAGTACTGTGGAATGCTTCCTGGTCATCGAAAGATGAGTGAATCTGATATTACTGAAATGAATAGCTTGTTAGAAGCTGGTATTGGTCCAACACATATCTATGGTCATTTCGCTCTACAACATGGGGGTTATGATAAAATTGGGTTTCGACTAAAGGACATTTATAATCAAATTGAACGACAAAGGCGCAAGCAAACATCTGATGCTATGGCTGCAATGGAGTACTTGAGGGGGTTGTCATGTGATGACAATATGATGTTCATTGAGCATACAGTAGATGATGAAGGTCGACTCCAACACCTTTTCTGGACTGATGGTATCAGTAAAAAAAGTTACCAAGTGTTTGGAGATGTTGTTGCATTTGATGCGACATATGGGAAGAATAAATATTTATTACCGCTGGAGCCAACTGCTATAATAACTGATGGAGACGTTACAATGAGAAATGCAATCAAAATTGTTTTCCCAAATGCTCGTCATCGACTTTGTGCTTGGCACCTGCAACGGAATGCGACTGCCAATGTGAAAAACCCCCAATTCACTGCAGAGTTTGAAAGGCTAATGTTGGGGGAGTATGATATTGGGCAATTTGGACGAAGGTGGGACGCAACTGTTACTAAATATGGTTTGCAAGAGCATCCTTGGGTGAAGAAAATGTTTGATTCAAGATCAAAGTGGGCTACAGCTTATTTTCGAGGTAATTTCTTTGCTGGTTTTAGGACAACCTCACGTTGTGAGAGTTTGCATGCTGAGTTAGGGAAATATGTTCATTCACGTCATAATTTGACGGACTTTTTGCACCACTATCATCGTTGCCTTAGTCACATGCGTTACAAAGAATTGGCTGATGAATTTTCTTGTCTTCATGGAGAGGCTGTCATGCAAACAAAGTTTCCGAGTATTGAAAGGTCGACCGCCAAGCATTTCACTAGAAGAGTATTTGGGTTGTTCCGGGCTATTTTGGAGAAAGCCAATGACATTACTGTTTGTAGTTGCTCGGAACTGCTAATGTATTATACGTTCACTGTGACTAAGGGTTCGACCATGAAGGAATGGCGTGTCTCTTTTTATCCGTCCAGTTTCCATTTTAAGTGTTCATGTATGTGGATGGAGTCACGTGGTTTGCCATGTGAGCATATAGTTGCTGTGTTGGTTCATCTTAATATAGAAGAGATTCCAATGACTCTTGTTTTAAGAAGATGGACATTGGGTGCTTTAGGTGACGGGCACAGGTTAAGTCATTATTTTCCGCACAATGTGTCAGGTTATTCTCTCATTAATTCTAATGAGGAGATAATTAGGGATCCTACTCGAGCAAGTACGAAAGGTAGAGGTAGTCCTTCATCCTCCAATCCTTCTGGTACTGTAAGGAGGAGGACTCATTGCTCTTATTGCAAGTTATCAGGACACAACCGAGTGACATGCCCTAAGCGTGCTCAAGATACACAACAGAGTCAGGACAATCATGAAGGAAGTGTGTCTCCAAGCTTTGAAGGTGTTGTGTGA 2238 0.4178 MNVFPFPVAARYKLLVSLVQKTELALLTSWSQGYAGAKFRKGFAGYTGAYYQWWSLLPCAHRCGLAVMEQGMYSAVSEEPTWQGLEQMSVSREDAGESDYGGVSNEWYEEEEDFHSDEDSDDATQEGVKVVNSGDEIKIGINCEEDIKSLDLVEFSPHMIRHYDFPSCDIAYLFYSLYGKSNGFSVRKGLRQDRGLKMEDRKREIRPETRCNCRANFRVHIDIVTGRWYATVFLDEHTHDLLDSKYCGMLPGHRKMSESDITEMNSLLEAGIGPTHIYGHFALQHGGYDKIGFRLKDIYNQIERQRRKQTSDAMAAMEYLRGLSCDDNMMFIEHTVDDEGRLQHLFWTDGISKKSYQVFGDVVAFDATYGKNKYLLPLEPTAIITDGDVTMRNAIKIVFPNARHRLCAWHLQRNATANVKNPQFTAEFERLMLGEYDIGQFGRRWDATVTKYGLQEHPWVKKMFDSRSKWATAYFRGNFFAGFRTTSRCESLHAELGKYVHSRHNLTDFLHHYHRCLSHMRYKELADEFSCLHGEAVMQTKFPSIERSTAKHFTRRVFGLFRAILEKANDITVCSCSELLMYYTFTVTKGSTMKEWRVSFYPSSFHFKCSCMWMESRGLPCEHIVAVLVHLNIEEIPMTLVLRRWTLGALGDGHRLSHYFPHNVSGYSLINSNEEIIRDPTRASTKGRGSPSSSNPSGTVRRRTHCSYCKLSGHNRVTCPKRAQDTQQSQDNHEGSVSPSFEGVV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi288g00006 745 MobiDBLite consensus disorder prediction 720 737 - -
Sebi288g00006 745 SMART 26again6 607 634 IPR006564 GO:0008270
Sebi288g00006 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 671 IPR031052 GO:0006355
Sebi288g00006 745 Pfam SWIM zinc finger 608 632 IPR007527 GO:0008270
Sebi288g00006 745 Pfam MULE transposase domain 379 414 IPR018289 -
Sebi288g00006 745 MobiDBLite consensus disorder prediction 685 701 - -
Sebi288g00006 745 MobiDBLite consensus disorder prediction 720 745 - -
Sebi288g00006 745 ProSiteProfiles Zinc finger SWIM-type profile. 601 632 IPR007527 GO:0008270
Sebi288g00006 745 MobiDBLite consensus disorder prediction 680 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi288g00006 Sebi-Chr288 225966 229319 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi288g00006 MULE 2.1e-08 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi288g00006 - - tpra:123913749 594.349