Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi287g00037 ATGGAGGAACATAAATCTGTGATCCCTTCCTGTGAAGAAGATCAACATGTGGTTGCTGCTGCTCAGCACATTTTAAAGGCTCTAGCTGCAAGTAAGACAGTCTCTGATGACTTGAGAAAAAATCTCTTGGATCTTGAGATCCAGTTGTCTGCAATGTCCATAGTCAGTGAAAGAAATGGAAGGGGCATCAAGCAATTAGAGAGACAACTTAAATGTGCTGAAGACAAGGTAATGAGTTGGGAGGCCAATCACTCCATGATATGGGACTCTAGTCCCAGAGAGTCTTCTGAGTTTTTAAAAGTTGTTGGGGAAATCCAAACACTGACTCAAAGTTTGCAAAACTGTTCTGTGAATGAAAATAGGAAGCAGAAGGAACTTCTTCAACGAGCTAATGGAATTCTGCAAATTGCTATGTCAAGGCTTGAGGAAGAGTTGGTTAACATTCTTGTTCAGCATAAGCAATACTTTGAGCCTGAATACATGTCTTTCCATTTTAATAGAGTGGATATGGTGTATGATGAGTCATTTGGTTCAGTTGAGGATGAACAAATAGAGGAGGCATCCCGGAGTAGCGGTGTTAGCCAGTCTGAGGCCAGCACTGTAGATTTGGTGAATCCAGCTATACTTGAGGATCTCAAGAGAATTGCTAATGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGTCTTCATTTCTTCCAGGAGAGGTGCCTTGGATGAGTACTTTTTCATTCTTGAAATGGAAAAATTAAGCATTGAGAATGTGCTGAAAATGGAGTGGAATTGCTTGAACCATGAGATAAAGAAATGGATTCGGGCTATGAAGATCATTGTTCCTGTGTATCTTCTCAGTGAGAAAAGATTATGTAAGCAGATTCTTGGAGACTTTGGATCTGTTTATCAATTTTGTTTCTCTGAAATATCTCAGAGTTTTATGTTGGAACTTCTAAATTTTGGAGAGGCCATAGCAATGGGAACACATCCACCAGAAAGATTGTTTCGTTTACTTGACATGTATGAGGTTTTGGAGCATCTTGCTGTGGATGTTGATATTTTGTTCTTTGAAGAAGTTGGTTCTTTTGTTAGGGGAGAGTTTTACAAACTTCTGAAGAGGTTTGGTGATACCATAAAGTCTACATTTCTGGCATTCAGAAACGCTATTGCAGCTGATCCATCAAAAACAAGTTTTCCTGGAGGGGGAGTTCACCATCTCACCAAGTATGTCATGAATTACATCAGGGCACTTGTTGAGTATGGTGATACCCTTAATCTTCTTTTAGAAGAAAATCCAACTGATGCATCAAACAATGACAACAAGCATGACAATTCAGCTCTCTCAGTTTGCACAATGGCTTGCCACTTTCGGTTAATCACTGCCACTCTAGAAACCAACTTGAGAAACAAATCCAAATTATACAAAGATGTGGCTTTGCAACATATTTTCATGATGAACAACATTCATTACATAGTGCAAAAGGTTAAGTGTTGTGACTTAAGCCATTTCTTTGGAGACTCCTGGCTTCGCCACCATGTTGGGAAGTTTCAGCAAGATGCTAGAAGTTATGAGAAGGTAACTTGGGGTTCAGTCCTTTCTATGCTTAGGGAGGATAATGTGCCAAATTGTATTTCAGAGAGAACTCTAAAGAAAAGGTGCAAAGAGTTTAGTACTGCTTTTGGTGAAGTATACAGGAGCCAGACAGGGTGGTGTATACCAAACTCTGAACTTCGTGAAGATCTACAAATTTCAGTTTCTCAGAAAGTAGTTCCTGCTTACCGCTCATATACTGGGAGAAACTCATCTAACATTGCTGAGAAGTGGATCAAGTACACTGTAGATGATCTGCAAAGTTATATTTTGGATCTTTTTCAAGGTTCATCAAAATCTTTGCCCCATGCTCAGCAAAAAAAGTGA 1917 0.3944 MEEHKSVIPSCEEDQHVVAAAQHILKALAASKTVSDDLRKNLLDLEIQLSAMSIVSERNGRGIKQLERQLKCAEDKVMSWEANHSMIWDSSPRESSEFLKVVGEIQTLTQSLQNCSVNENRKQKELLQRANGILQIAMSRLEEELVNILVQHKQYFEPEYMSFHFNRVDMVYDESFGSVEDEQIEEASRSSGVSQSEASTVDLVNPAILEDLKRIANVMFASKYHQEFCQVFISSRRGALDEYFFILEMEKLSIENVLKMEWNCLNHEIKKWIRAMKIIVPVYLLSEKRLCKQILGDFGSVYQFCFSEISQSFMLELLNFGEAIAMGTHPPERLFRLLDMYEVLEHLAVDVDILFFEEVGSFVRGEFYKLLKRFGDTIKSTFLAFRNAIAADPSKTSFPGGGVHHLTKYVMNYIRALVEYGDTLNLLLEENPTDASNNDNKHDNSALSVCTMACHFRLITATLETNLRNKSKLYKDVALQHIFMMNNIHYIVQKVKCCDLSHFFGDSWLRHHVGKFQQDARSYEKVTWGSVLSMLREDNVPNCISERTLKKRCKEFSTAFGEVYRSQTGWCIPNSELREDLQISVSQKVVPAYRSYTGRNSSNIAEKWIKYTVDDLQSYILDLFQGSSKSLPHAQQKK 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi287g00037 638 Gene3D Exocyst complex component Exo70 78 633 - -
Sebi287g00037 638 Coils Coil 124 144 - -
Sebi287g00037 638 Pfam Exo70 exocyst complex subunit 270 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi287g00037 638 SUPERFAMILY Cullin repeat-like 86 624 IPR016159 -
Sebi287g00037 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 626 IPR004140 GO:0000145|GO:0006887
Sebi287g00037 638 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi287g00037 Sebi-Chr287 992118 994034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi287g00037 1 625 EXO70 exocyst subunit family AT5G61010 44.674 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi287g00037 K07195 - gmx:100791622 963.755