Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00083 ATGATAATGGTGGCTTTTGGCGGGAAAAAAGTTGGCCAAATGGTCGTCGGCTTCGGCGGCAGCGGTCTCGGCCAGGTTGTCATCGCCGTCACCGTCTCCTTCCTTGTCCGCATCTTCTCTGCTCCCGGCCCCGCCCTCTTGGCGGAGAACGACGATGACGACGATGTGCCGAACAGCGATTCCCACAACGGTGAAACTTCGCCCTCCGGAAAGGTCACGCCGGTCACAATCCGCTGGAACAGTATCAATTGTTCCCTTTCTGATAAATCCTCCAAGTCCGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCGAAGCCTGGAAGATTGTTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTGGGAGCATCGCCATGGCTGCATTTGACGGGCCTTTTGGAGTTCAATGGAAAGCCTCGTTCCAAAAACCCTTACAAGTTTGCTTATGTGAGACAGGAGGATCTCTTTTTCTCACAGCTCACTGTGCGGGAAACATTGTCTCTTGCTACAGAACTCCAGCTTCCCAACCTATCTTCCGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGATCAGTTGTGCTGATACCAATGTCGGTGATGCAAAAGTTCGTGGAATTAGCGGTGGTGAAAAGAAACGCTTATCAATGGCATGTGAATTGCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACACTCCAACAACTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTGACTGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAAGCATTGGCATACTTCTCAAGATTCGGGTACAACTGCCCAGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATCGACTATAGTTCTGCTGATAGTGTCTATTCCTCTCGAAAAAGGATTGATGGGCTTGTGGAGTCATTCTCACAAAGACTATCTACAGTAATATATGCAACTCCAATTACTATAGACGATCTCTCAAAAAGTAGAAAGCAAATCAGAAAGAGGACTGTAGCAAAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGCTTGGATGCAGGCTTCCCGAGATGCACCTACTAACAAAGTTCGGGCAAGGATGTCAATTGCATCAGCAATTATCTTTGGGTCAGTTTTTTGGAGAATGGGAAAATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAATACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCCAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCATATCTGTTTTCGAAATTGTTGGCTGAGATTCCTATCGGAGCAGCATTTCCATTAATGTTTGGTGCAGTTTTGTATCCAATGGCGCGTCTTCATCCTACTTTGACGAGATTTGGGAAGTTCTGTGGAATTGTTACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGGTCTTTGCATCAATGAATTTAGTGGCCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAGGAAGTAGGATTAGGGATACGGTGGTAGCACAAAGTAGAATACTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAGAAACAAGCCCAGATACCAGCAACTTGAAACAACCCCTCTTGACCATGACGAACCCCATTTAAAACTTGAGGAGTTCAATTCTAAACAAGTTCATCAGGCATTTGAAGCTACACCAGTCAGCCAAGTTGGTTCTGACCAGCCCCTTGAGTCACCTGAAGTAGATCTTGTTGGCTCTTTTGTCCTAGAAGGTGCTAAGTAG 2070 0.4546 MIMVAFGGKKVGQMVVGFGGSGLGQVVIAVTVSFLVRIFSAPGPALLAENDDDDDVPNSDSHNGETSPSGKVTPVTIRWNSINCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLGASPWLHLTGLLEFNGKPRSKNPYKFAYVRQEDLFFSQLTVRETLSLATELQLPNLSSAEERDEYVNNLLFKLGLISCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPARDEALAYFSRFGYNCPDHVNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYATPITIDDLSKSRKQIRKRTVAKKKGGWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGKSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTLTRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAGLCINEFSGLQFDHQHSFDVQTGEQALERISFGGSRIRDTVVAQSRILLFWYCTTYLLLERNKPRYQQLETTPLDHDEPHLKLEEFNSKQVHQAFEATPVSQVGSDQPLESPEVDLVGSFVLEGAK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00083 689 FunFam ABC transporter G family member 7 75 313 - -
Sebi286g00083 689 Pfam ABC transporter 98 250 IPR003439 GO:0005524
Sebi286g00083 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 323 IPR003439 GO:0005524
Sebi286g00083 689 Pfam ABC-2 type transporter 400 563 IPR013525 GO:0016020|GO:0140359
Sebi286g00083 689 SMART AAA_5 107 300 IPR003593 GO:0016887
Sebi286g00083 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 309 IPR027417 -
Sebi286g00083 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 65 565 - -
Sebi286g00083 689 MobiDBLite consensus disorder prediction 49 73 - -
Sebi286g00083 689 CDD ABCG_EPDR 74 305 - -
Sebi286g00083 689 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Sebi286g00083 689 Gene3D - 71 314 IPR027417 -
Sebi286g00083 689 Pfam ABC-2 type transporter 280 337 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00083 Sebi-Chr286 1165162 1174381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00083 83 305 Calmodulin-binding Proteins AT2G36910 26.872 1.22e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00083 K05681 - gmx:100788256 1176.77