Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00071 ATGGATCCAGTATCTGCTGATGTGTCTAATTCACCACCTGTTAAAGTTCCATCTACTTCACCTCCTGCTAAAGAGGCTGATGGACAAGCTTCAGCTGCTGTTGCCTCTGGACAAGATAATTCTGCCCCTGAGGCACCATCTAGGCTAAATTCCACTGGCATATCATCTTGGGCCAAAAATTTGAAAATTTCTCAATCATTTTCTGGCTCCCAAGATGACTCACCAAGTGGAAATGTTGGGAAATCAGCTTTTGCACGCCTCACTAGCCTGGTTGACTCTTCTAAGAATGCTGTAAAAGCTGTACAGGTTAAAGCGCGGCATGTTGTTTCTCAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATTATTGCAATGGGGTTTCCTGCTGGTGACATGAGCTCTGGCTTTTTTGGTTATGTCGAAGGATTTTACCGAAATCACATGGAAGAAGTGATTAAGTTTTTTGAGACTCACCATAAGGGTAAATACAAAGTATATAATCTCTGTTCTGAGAGGCTGTATGACGCATCATTGTTTGAGGGGAAGGTTGCTAGCTTCCCATTTGATGACCATAATTGCCCACCAATTCAACTGATTACATCATTTTGTCAAAGTGCATACTCATGGTTGAAAGAAGATATTGAAAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGGCGAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAGTCAATGGATTACTATAATCAAAAAAGATGTATTGATGGAAAAGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGGGTGTTGACATACTTTAATGGCGAAATCCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCAGGCTTCACAGATGCCCTTACTGGATCAGGCCCTCTATAACTGTCTCTGATCATAGAGGTGTGCTGTTCTTGGACTAA 1002 0.4162 MDPVSADVSNSPPVKVPSTSPPAKEADGQASAAVASGQDNSAPEAPSRLNSTGISSWAKNLKISQSFSGSQDDSPSGNVGKSAFARLTSLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLITSFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCIDGKGLVLPSQIRYVKYFERVLTYFNGEIPPARRCMLRGFRLHRCPYWIRPSITVSDHRGVLFLD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00071 333 Gene3D Protein tyrosine phosphatase superfamily 99 296 IPR029021 -
Sebi286g00071 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 228 267 IPR000387 GO:0016311|GO:0016791
Sebi286g00071 333 MobiDBLite consensus disorder prediction 33 51 - -
Sebi286g00071 333 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 99 296 - -
Sebi286g00071 333 MobiDBLite consensus disorder prediction 1 51 - -
Sebi286g00071 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 127 295 IPR029021 -
Sebi286g00071 333 CDD PTP_PTEN 124 288 IPR045101 GO:0016791
Sebi286g00071 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 230 240 IPR016130 GO:0016311|GO:0016791
Sebi286g00071 333 ProSiteProfiles Phosphatase tensin-type domain profile. 114 293 IPR029023 -
Sebi286g00071 333 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 91 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00071 Sebi-Chr286 1030038 1033087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00071 33 331 Protein tyrosine phosphatase (PTP) family AT3G19420 74.328 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00071 K01110 - gmx:100784003 595.89