Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00063 ATGAGCCATAACTCCCAAAATCTCCATTTTTGGTGGAAAGTTTCATCCTTTCTTCTCCTAGTTCTTCAATCTGTTGCTCTTAACTCTGATGGGATTCTCTTGCTTAAATTCAAATACTCCATCCTCAGTGACCCATTATCAGTCCTAGACAGCTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTACATGCACTGAAACTGGATCCCCTGGTACTGGTACCCCTGATTTGTTCAGAGTAACAAGCTTGGTTCTTCCAAACAACCAACTTCTAGGTTCCATTGCTGAAGAATTAGGCATGATCCAATACCTTCGCCATCTTGATCTCTCCAACAATTTCCTTAACGGATCTCTACCAAACTCTATCTTCAACTCTTCTCATCTTCAAGTTCTTTCTCTCTCAAACAATGTCATCTCAGGCCAGTTACCTGAGTTGATTGGTAAATTGACAAGCCTTCAATTTCTCAACCTTTCTGACAATGCCTTTGCTGGGTTGATCCCAGAAAATCTCACTGCTTTACAAAATCTAACAGTTGTTTCTCTCAAGAGTAACTATTTTTCTGGTGAAGTCCCAACTGGGTTCAACTCAGTGGAGATTTTGGATCTGTCTTCCAATTTGCTCAACGGTTCTCTACCAAATCACTTTGGTGGTGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATCTCAGGAACAATACCACCAGCATTTGCTAAACAGATTCCTGGAAACTCTACAATTGACCTCTCATTCAACAATCTCACAGGACCAATACCTGAGTCTCTGGCTCTGCTCAACCAAAAAACAGAGTTACTATCTGGGAATGCTGATCTATGTGGGAAGCCTTTGAAGATTCTTTGCTCTATTCCCTCTACTATTTCAACTCCTCCACCTAACATCACCAACACATCTTCACCAGCAATTGCAGCCATACCAAAAACAATTGACACAAACCCAACAACAAACACAACAGAAAACCCTTCTCAGAATGTCTCACAGAATGGCCTAAAACCTGCTACCATAGCAGCCATTGTGGTTGGAGACTTAGCTGGCATGGCCGTTTTAGCCTTAATCATTCTCTTTGTCTACCAACAAAGAAAGAGAAGAGATCCAAAACCAGCCACAGCCACAACCACAACCAACTCAGAAAAGAAACAGCAAATTGTTGCAAGACAAGACCCAGAGGTGAGAACAACCTCACTTCCATTTTCCTGCTTAAAAATCAAAGAAGAAGAGACTTCAGAGGCAACAAGCTCTGACAGTGACCATGACAACAACACCAACATGGACATCACAGCACAAAACGAGAATCTTCCAAAAGAAGGCACTCTTGTAACGGTGGACGGAGAGACAAAACTGGAACTGGACACTCTGCTGAAAGCCTCAGCATATATTCTTGGAACTAGCCGGAAAGGAGGTTCATCCCCTGTTAATTTATCCTTAGAGGTGCGGTTGAAGATAGCAAAAGGGGTTGCAAGAGGCTTGGCTTTCATTCATGAGAAGAAACACGTGCATGGCAACATTAAACCCAGCAATATTCTGTTAAACTCAGAAATGGAACCCATCATAAGTGATTTTGGGTTGGACCGGCTACTCTTGAATGATAGTATCAACCAGAGAGCAAACGGTTCGGCTAGGCAATTAATGGTGAACCAAAGAACCCAACAAGAACCTCCAATTGGTTCTGTTTCTAGCCCCTATGCAACAATGGGACCATCATCTAGTGGGGGCCAGGGTCAAGTACCATATCAAGCACCAGAGTCACTACAAAACATCAAACCAAGCCCCAAATGGGACGTCTATTCGTTTGGCATTGTGTTGTTGGAGCTTCTCAGTGGGAGGGTTTTCTCAGACCGGGAGTTAGACCAGTGGTCTGAAGTATCCGGTTCGGTTGAAGAGGAAAAAAACCGGATCTTGAGGTTAGCTGACGTGGCCATCAAGGCTGAGATAAAAAGCAGAGAAAATGTGATATTGGGATGCTTCAAGTTGGGGCTTAGCTGTGCTTCTCTTGTCCCACAAAAGAGACCATCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTGCCATTAATTAA 2097 0.4325 MSHNSQNLHFWWKVSSFLLLVLQSVALNSDGILLLKFKYSILSDPLSVLDSWNYDDATPCSWHGVTCTETGSPGTGTPDLFRVTSLVLPNNQLLGSIAEELGMIQYLRHLDLSNNFLNGSLPNSIFNSSHLQVLSLSNNVISGQLPELIGKLTSLQFLNLSDNAFAGLIPENLTALQNLTVVSLKSNYFSGEVPTGFNSVEILDLSSNLLNGSLPNHFGGESLRYLNLSYNKISGTIPPAFAKQIPGNSTIDLSFNNLTGPIPESLALLNQKTELLSGNADLCGKPLKILCSIPSTISTPPPNITNTSSPAIAAIPKTIDTNPTTNTTENPSQNVSQNGLKPATIAAIVVGDLAGMAVLALIILFVYQQRKRRDPKPATATTTTNSEKKQQIVARQDPEVRTTSLPFSCLKIKEEETSEATSSDSDHDNNTNMDITAQNENLPKEGTLVTVDGETKLELDTLLKASAYILGTSRKGGSSPVNLSLEVRLKIAKGVARGLAFIHEKKHVHGNIKPSNILLNSEMEPIISDFGLDRLLLNDSINQRANGSARQLMVNQRTQQEPPIGSVSSPYATMGPSSSGGQGQVPYQAPESLQNIKPSPKWDVYSFGIVLLELLSGRVFSDRELDQWSEVSGSVEEEKNRILRLADVAIKAEIKSRENVILGCFKLGLSCASLVPQKRPSMKEALQILDKIPASAIN 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00063 698 MobiDBLite consensus disorder prediction 373 398 - -
Sebi286g00063 698 Pfam Leucine rich repeat 106 164 IPR001611 GO:0005515
Sebi286g00063 698 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Sebi286g00063 698 Pfam Protein kinase domain 488 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi286g00063 698 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 691 - -
Sebi286g00063 698 MobiDBLite consensus disorder prediction 378 398 - -
Sebi286g00063 698 FunFam Leucine-rich repeat receptor-like protein kinase 200 293 - -
Sebi286g00063 698 Pfam Leucine Rich Repeat 222 242 IPR001611 GO:0005515
Sebi286g00063 698 SUPERFAMILY Protein kinase-like (PK-like) 482 691 IPR011009 -
Sebi286g00063 698 SUPERFAMILY L domain-like 33 289 - -
Sebi286g00063 698 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 199 - -
Sebi286g00063 698 Gene3D Transferase(Phosphotransferase) domain 1 464 697 - -
Sebi286g00063 698 ProSiteProfiles Protein kinase domain profile. 348 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi286g00063 698 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Sebi286g00063 698 CDD TM_EGFR-like 344 373 - -
Sebi286g00063 698 MobiDBLite consensus disorder prediction 414 433 - -
Sebi286g00063 698 Gene3D Ribonuclease Inhibitor 198 293 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00063 Sebi-Chr286 921631 924137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00063 26 692 Receptor kinase-like Gene Family AT2G15300 44.459 2.74e-178 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi286g00063 Pkinase 6.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00063 - - cave:132177363 685.256