Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00050 ATGGAGGCCAAGGCAAAGGAGGAATTTGAAGTGGACCATTTGACCACACCAACAGGGACCAGTTTCTCTCAGTTACTATTCGGAGATGGTGATGATGAGGATGAAAATACATTGAGTCTTGCTGTGGACCAGGCTTACAACCTTAACCATTCTACTGTTTTCTCCACTCACAACACACCCAAAATGCTATGTTTTGGTAACTATCAAAATGAAGGGGACTTTTTGCTTTCTGAAACCAACGTGACCCCCCAGAAATCTGTCATCACTTCAAGTGATTCTTCATCGCCTTCTTCCTGCAATCAAACAACCACCAACTTCAATTCATTACAAAAGACTAATAAAAAGAGGAATGGGTCAGGACAAGAACCGGGGACCAGGGGAAGTGTTGGAAACCAGAAACCGCCTAAGAAGACCAAAGCAGAGAACCCCACTTCAACAGGACATGCAAGGAGAAAGGAGAAGCTTGGGGAAAGAATTGCAGCTTTGCAACAGCTTGTTTCTCCCTTTGGCAAGACAGATACAGCTTCGGTGCTTCACGAGGCCACAGGGTATATAAGATTTCTACATGACCAAGTTCAGGTTCTGTGCTCCCCTTACTTGCAACGTTTGCCTGCCTCACAACACCAATTTCAACATCAACCTGGGGACGGAGATAACAATGGAGAGGAAGTGAGGAAGGATTTGAGGAGCAGGGGTCTCTGTTTGATCCCTGTGGGGTGCACCCTACACGTGGCAAGTAGCAATGGTGCTGATTTCTGGTCACCTGCTGCTATAGGGAACAATGTTTCACCATCAGCTAAGCAGTGA 807 0.4622 MEAKAKEEFEVDHLTTPTGTSFSQLLFGDGDDEDENTLSLAVDQAYNLNHSTVFSTHNTPKMLCFGNYQNEGDFLLSETNVTPQKSVITSSDSSSPSSCNQTTTNFNSLQKTNKKRNGSGQEPGTRGSVGNQKPPKKTKAENPTSTGHARRKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIRFLHDQVQVLCSPYLQRLPASQHQFQHQPGDGDNNGEEVRKDLRSRGLCLIPVGCTLHVASSNGADFWSPAAIGNNVSPSAKQ 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00050 268 MobiDBLite consensus disorder prediction 86 142 - -
Sebi286g00050 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Sebi286g00050 268 Gene3D - 147 211 IPR036638 GO:0046983
Sebi286g00050 268 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 244 - -
Sebi286g00050 268 MobiDBLite consensus disorder prediction 86 152 - -
Sebi286g00050 268 FunFam Transcription factor bHLH113 132 202 - -
Sebi286g00050 268 CDD bHLH_AtbHLH_like 150 195 IPR045239 -
Sebi286g00050 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 201 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00050 Sebi-Chr286 726409 728198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00050 126 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.382 8.60e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00050 - - gmx:100809317 360.918