Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00038 ATGCTGCGTTTGTGCTTCACTCCTCTCGATTGTTGCTTCCGACGCCGTGGTGGTGCTGACGGACTTCTCTGGCACACCGACTTGAAACCTCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAAGCCAATTACAGTCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCTTCCGCCACTTACGTTGGCGTCTACGACGGCCACGGCGGACCTGAAGCTTCTAGATTCGTCAACAAACATCTCTTCCCTTATTTGCACAAATTTGCCACTGAGCAAGGGGGATTGTCTGTGGATGTGATAAAAAAGGCCTTTAGTGCCACGGAGGAGGAGTTCTTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCCCAGATTGCTTCTGTGGGATCTTGTTGTCTTCTTGGTGCAATTTCAAATAATGTGTTGTATGTTGCCAACCTTGGAGACTCCAGAGCTGTTCTTGGCAGGAGGAATATGGAGGGCAAGAATTGTCCTGTGGTGGCGGTGCGCTTGTCAACTGATCATAATGTAGCTGATGAGGAGGTGAGGAGAGAAGTTGAAGCCCTCCACCCTGATGATTCGCACATTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGAATCATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAGACCTGATTTCTACAGAGACCCTGTTTTTCAGCGATTTGGAAATCCTGTTCCTTTGAAGCGCCCTGTAATGACAGCTGAACCATCAGTCATTATTAGGGAGCTTGAATCAGAAGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTATTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCAGCTCTTCATGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATCAGACGGCACTTTCATGATGATATCACTGTTATTGTAATATATCTTGATCACCATGCAGGCTCCTCTAATGGTAGAATTAAGCAAAATGCTGTTGGCTATACAACTGCTCCTGTTGATATTTTTACCCTAAATGCCGATGAAGCAGAAAAGAGTATGCTTGGTACAGTTGCCTAA 1140 0.4553 MLRLCFTPLDCCFRRRGGADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRRNMEGKNCPVVAVRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQRFGNPVPLKRPVMTAEPSVIIRELESEDLFLIFASDGLWEQLSDEAAVEIVFKYPRAGIAKRLVRAALHEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHAGSSNGRIKQNAVGYTTAPVDIFTLNADEAEKSMLGTVA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00038 379 Gene3D - 26 346 IPR036457 -
Sebi286g00038 379 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Sebi286g00038 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Sebi286g00038 379 CDD PP2Cc 48 337 IPR001932 -
Sebi286g00038 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Sebi286g00038 379 PANTHER PROTEIN PHOSPHATASE 34 336 IPR015655 GO:0004722|GO:0006470
Sebi286g00038 379 SMART PP2C_4 29 335 IPR001932 -
Sebi286g00038 379 Pfam Protein phosphatase 2C 56 305 IPR001932 -
Sebi286g00038 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00038 Sebi-Chr286 552520 554708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00038 17 344 PP2C-type Phosphatase Gene Family AT3G51370 57.440 4.43e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00038 K01102 - gmx:100812137 695.271