Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi286g00026 ATGGAACCTACTCAGTTGATTTCTGAAGAATGGGGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTCATGGCTCAGTTGCTTGATGGAAATACCAGTTTTAGGCCTGGCCATGAATCAACAATAGTGACCTTGACAAGCACCAATAGCAATTCATATTTTCCTTCAAATGTTGCAAATACTAATTTCCTCTGTTTCTCCCAAGGGAGTAGTCCCAGCACTGATAGTGGTAATATCTTTTCCACCAGCACAAGTAGTGGAACTTGCTCCTTTGATCCAGCAACAAACATTGACTCTGTCTCCATGGTTTTTTGCTTGGGAGATTCCAAATCTAGTCTTCAATGGAATGACAACATAAGCCAACAGATGAATGAAAGCACTGATGAAGAGTCAGGTCTAGACCTAGAGAAGCTGGTTTTTGCTGACAACAATTGGCAGGCTAAGAGGGAGTATGAAATGATGAATTTTGAACCTTCAGAAGAGGATAGAAGCAGAAACCTGGAGAACCCAGCAAAAAGATTTAGGAGCTCAATAGAGGTGTCAAAAAACATGAGGAATGCTAGGAAAAATCCAAAATCTGCTTCTATGAGTAAGAATGAAGAGGGTAGAAGCACATGCCTCCAAATGCAGGGCTCCAGCACCTGTTTTTCACATGTTGACTCTAATGCTTCTCTAGAGCTAAATGGAGGGGCATCTTCAAGTCTGAGCCCAAAAGATCCTGCAGCTCCTAATTTATATAGAAAATCAAGAGCAACCAATGGTCCTGCCACTGATGCACAGAGCATATATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAAAATACTGCAAAACCTTGTCCCAAACGGAACTAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTCCAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCGGATGATCTGTGGATGTATGCTCCAATTGCTTACAATGGAATAAACATTGGATTAGAGCTCAGTACTTCTCCAACTAAAGGAAGATGA 1032 0.4118 MEPTQLISEEWGSLSGLYTAEEADFMAQLLDGNTSFRPGHESTIVTLTSTNSNSYFPSNVANTNFLCFSQGSSPSTDSGNIFSTSTSSGTCSFDPATNIDSVSMVFCLGDSKSSLQWNDNISQQMNESTDEESGLDLEKLVFADNNWQAKREYEMMNFEPSEEDRSRNLENPAKRFRSSIEVSKNMRNARKNPKSASMSKNEEGRSTCLQMQGSSTCFSHVDSNASLELNGGASSSLSPKDPAAPNLYRKSRATNGPATDAQSIYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGINIGLELSTSPTKGR 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi286g00026 343 MobiDBLite consensus disorder prediction 230 261 - -
Sebi286g00026 343 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 70 315 IPR045843 GO:0003700|GO:0006355
Sebi286g00026 343 MobiDBLite consensus disorder prediction 158 174 - -
Sebi286g00026 343 MobiDBLite consensus disorder prediction 182 208 - -
Sebi286g00026 343 FunFam Basic helix-loop-helix transcription factor 258 315 - -
Sebi286g00026 343 Gene3D - 260 315 IPR036638 GO:0046983
Sebi286g00026 343 CDD bHLH_AtIND_like 258 320 - -
Sebi286g00026 343 MobiDBLite consensus disorder prediction 158 208 - -
Sebi286g00026 343 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 257 306 IPR011598 GO:0046983
Sebi286g00026 343 SMART finulus 263 312 IPR011598 GO:0046983
Sebi286g00026 343 Pfam Helix-loop-helix DNA-binding domain 267 307 IPR011598 GO:0046983
Sebi286g00026 343 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 258 322 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi286g00026 Sebi-Chr286 377102 378603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi286g00026 10 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 39.945 5.62e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi286g00026 HLH 3.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi286g00026 - - gmx:100816788 459.529