Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00085 ATGGTTGCGGAAGCGGAAATTATCTGTCAGCAGAGCATTCCCATGTTAGACGTGAAGTATCACCTTTGCGTGGCACAAGAACACAACGTAAAGGCTGAGGTTTCACCCACCTCACCTTCCCCTTCTGTCCAGATCTTTGGCCAAGCTGTGAGTTGCTCTGAGATCATTCAAGATTCCATTATGGAGATCCCTACAACGAAGTTTATCCCAAATGTGCGTTCTGGTAGCTATGCTGAAATTGGACCACGGGGATCTATGGATGATGAACACATTAGGATAGATGATCTAGCTGAGCACCTTGGATTTGTGTTCAAGTACCCAATACCAAGTGCATTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAGGAATGCTATGAGATTATTTTTTGAAGATTCTAGCATGCTGCAATCATATGATACTGATGCATTTTTTCTGAAGAAGTTGGAGGATTCTCATCGGAGAGCATTTTTACGGGCAGATCTTGCCTTGGCTGATGAAGAAAGTGTTAGTAGTTCATGTGGGACTACAGCATTGACTGCCCTTGTACTTGGAAGCCATTTGCTTGTTGCTAATGCTGGTGACTGTCGAGCAGTTCTTTGCAGGAGAGGTGCAGCTGTTGAGATTTCTCAAGATCATAGGCCAAGTTATTTACCGGAACGTAGGAGAGTGGAAGAGTTAGGTGGCTTCATTGATGATGGATATCTGAATGGTTATCTTTCTATAACCCGTGCCCTTGGGGATTGGGACTTAAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCTGAGCCCGATGTTCAACTGATTACATTGACAGAGGATGACGAGTTCTTGATCATTGGGTGCGATGGGATTTGGGATGTAATGTCTAGCCAATTTGCAGTTAGTCTTGTTCGTCGAGGATTAAGAAGGCATGATGACCCACAGCAATGTGCCAGAGAACTAGTCAAGGAAGCATTGCGGCTAAATACATCTGATAATGTCACTGTGATTGTTATATGTTTGTCCTCCATTGAAAGCATCGTTGAATCATGTCCGCCCCAAAGGCGAAGATTCAAAGCATGCAGTCTGTCTGAAGAGGCCCGTAATAGATTGAAGAGCTTGATAGAAGGAAATTGA 1143 0.4401 MVAEAEIICQQSIPMLDVKYHLCVAQEHNVKAEVSPTSPSPSVQIFGQAVSCSEIIQDSIMEIPTTKFIPNVRSGSYAEIGPRGSMDDEHIRIDDLAEHLGFVFKYPIPSAFYAVFDGHGGPDAAAFVKRNAMRLFFEDSSMLQSYDTDAFFLKKLEDSHRRAFLRADLALADEESVSSSCGTTALTALVLGSHLLVANAGDCRAVLCRRGAAVEISQDHRPSYLPERRRVEELGGFIDDGYLNGYLSITRALGDWDLKFPLGAASPLIAEPDVQLITLTEDDEFLIIGCDGIWDVMSSQFAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNVTVIVICLSSIESIVESCPPQRRRFKACSLSEEARNRLKSLIEGN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00085 380 Gene3D - 63 348 IPR036457 -
Sebi285g00085 380 SMART PP2C_SIG_2 88 343 IPR001932 -
Sebi285g00085 380 SUPERFAMILY PP2C-like 66 344 IPR036457 -
Sebi285g00085 380 ProSiteProfiles PPM-type phosphatase domain profile. 73 343 IPR001932 -
Sebi285g00085 380 FunFam Probable protein phosphatase 2C 22 57 346 - -
Sebi285g00085 380 CDD PP2Cc 72 343 IPR001932 -
Sebi285g00085 380 PANTHER PROTEIN PHOSPHATASE 2C 57 341 IPR015655 GO:0004722|GO:0006470
Sebi285g00085 380 Pfam Protein phosphatase 2C 83 336 IPR001932 -
Sebi285g00085 380 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Sebi285g00085 380 SMART PP2C_4 63 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00085 Sebi-Chr285 1015488 1017182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00085 1 379 PP2C-type Phosphatase Gene Family AT1G48040 56.489 5.32e-148 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00085 K14803 - gmx:100775577 684.1