Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00069 ATGGAGTTAACTCCAAGATCCTTAACTCCAAGATCTTTAACTCCAAAATCTTTGACTCCAAGATCTTTAACTCCACTAGCCTTAACTCCAAGAGGTTTAACTCCAAGGGGGATAAATCAAGGTCATGTCTTCAGCTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCTATTGAGAAGTTACCTACTTTCAAACGGATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGGGTGAAAGCAGCAGCAAAGAAGCAGATGGCAAAAGGGTGATTGATGTTACCAAGCTTGGAGCAGTGGAAAAGCGTTTGTTCATTGACAGGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGGTCAAGCAAACATGGGCTAACTTGTCACTTGAACAGGGTTTCATGAAAACTATATCGTGTAATTCTCAAGGAGCAGATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCTGGAAAACTAGAGGAATCTCTCAAGGTTTCTGGCGAAATCTCATACAATGGTTACAAACTAGATGAATTTTTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACGTTCCTGAGATGACAGTGAGAGAAACAATTGACTTTTCGGCACGCTGTCAAGGTGTTGGAAGCAGAGCTGATATAGTAGCTGAAGTCACCAGGAGAGAAAAAGAAGAAGGAATCATCCCTGACCCAGATATTGATACCTACATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTGTAAAGATTCTCGGACTGGATATCTGTGCTGACATTCTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGGGAGATGATTGTGGGTCCCATAAAGACTCTTTTCATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTGCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCAGCACCAGAAACCTTTGAGTTGTTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCCGCAGTCAAGCAATCCAGTTTTTCAATGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAGTACTGGTACCGCACAGATATTCCTTACAGATATATATCAGTGGATGAGTTCTCTCAAATCTTCAAAACAAGTTATTGGGGAAGAATGTTAGCTGCTGAGCTCTCACACCCATATGATAAATCTCAATCCCAAAAAAGTGCTTTATCATTTAGCAAGTACTCCTTGGGAAAAATGGAATTGTTTAAAGCTTGTATGAAGAGGGAGATTCTTCTCATGAAAAGGAATTCATTTATCTATGTATTCAAAACTGTACAGCTTACAATCACTGCAATCATAACAATGACAGTTTTCTTGCGTACTCAGCTGACTGTGGACTTGATAGGGGCTAACTATTTATTGGGTTCATTGTACTATACACTTGTACGCCTCATGACTAATGGAGTTGCTGAGTTGATCATGACTATTACTAGACTTCCTGTTGTTTATAAGCAGAAGGCATTCTATCTTTATCCAGCTTGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTGCTTGATTCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGCAATTTCTTTTGCTAGTCACTCTGCACATGTCATCAACTTCCATGTGTCGTTTCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGGCCATCATTACCAAAGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCAATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGGTCCTCGCTGGCAGAAGATCCAAAATGGAAACATCACAGTAGGAAGGGAGGTTCTTAGGGATCATGGTTTAGACTTTGATAGCAACTTCTACTGGCTATCAGTTGGAGCCCTGCTTGGTTTCACAGAGATGAGAAAACATGGTTCCAATGAGAAAAAACTACAATTGCTCCGTGATATCACAGGAGCCTTCAGGCCAGGAATTCTCACTGCATTGATGGGAGTCAGTGGAGCAGGGAAGACAACTCTTATGGATGTCCTTTCAGGAAGGAAAACTGGTGGTATCATTGAAGGAGAAATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCAAATACTCAGCTTGGTTGCGGCTGCCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTCTTTAGTTGGCATCCCTGGCCAAAGTGGCTTATCTACTGAACAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACTGTTTGCACAATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGGCAAATTATTTATAATGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAGTATTCCTGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTGTAGAGGCAGAACTTCAAATAGATTTGCAAAAATCTATAAGGAGTCACACCTTCACCGGTTTTAAGTGCCCTAACTGGGATACCCTTGAAGTGGTGAGACAGTTAAGTGAACCACCACCAGGTTCAAGAGACTTACACTTCTCAACTCCCTTCCCACAAAATAACTTGGGGCAGTTCATGGCATGCCTATGGAAGCAACACTTGTCTTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCGTGTTCATGGTTGTTGCAGCAGTGGCCATTGAAATACCATATATCTTAGTGCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCAGTGGTCAGTTCAGAAGGTCTTTTGGTACTTCTACACCACATTCTGCACATTTTTATACTTTGTATATCTTGGAATGCTGATAATGGCAGTGAGTGCAAATCTCGATTTAGCTTCAGTATTATCAACTGCAATCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCAAAATGGTGGGTCTGGTGCTACTGGATTTGCCCTACGGCTTGGTCCTTGAATGGCCTCCTAACTTCACAATATGGAGGCATGGACAAAGAGATACTGATATTTGGGGTGAAAAAATCAGTTGGATCCTTTCTGAAAGATTACTATGGGTTCCGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTACCCAATTGTATATGCTTCTCTCTTTGCCTATTGCATAGGGAAAATGAATTACCAAAAGAGATAG 3864 0.4105 MELTPRSLTPRSLTPKSLTPRSLTPLALTPRGLTPRGINQGHVFSFDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQEEGESSSKEADGKRVIDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMDRVNVKLPTVEVKQTWANLSLEQGFMKTISCNSQGADISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEESLKVSGEISYNGYKLDEFFPQKTSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADIVAEVTRREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVVKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQAIQFFNDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYRYISVDEFSQIFKTSYWGRMLAAELSHPYDKSQSQKSALSFSKYSLGKMELFKACMKREILLMKRNSFIYVFKTVQLTITAIITMTVFLRTQLTVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMTYGEIGITLNEFLGPRWQKIQNGNITVGREVLRDHGLDFDSNFYWLSVGALLGFTEMRKHGSNEKKLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGEIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGMLGHHSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSASVEAELQIDLQKSIRSHTFTGFKCPNWDTLEVVRQLSEPPPGSRDLHFSTPFPQNNLGQFMACLWKQHLSYWRSPEYNLTRFVFMVVAAVAIEIPYILVQSILYVAITYPMIGFQWSVQKVFWYFYTTFCTFLYFVYLGMLIMAVSANLDLASVLSTAIYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGGMDKEILIFGVKKSVGSFLKDYYGFRHDRLSLVAVVLIAYPIVYASLFAYCIGKMNYQKR 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00069 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 762 1005 IPR003439 GO:0005524
Sebi285g00069 1287 Pfam ABC-2 type transporter 1110 1225 IPR013525 GO:0016020|GO:0140359
Sebi285g00069 1287 Pfam ABC-2 type transporter 514 722 IPR013525 GO:0016020|GO:0140359
Sebi285g00069 1287 Pfam ABC-2 type transporter 961 1030 IPR043926 GO:0140359
Sebi285g00069 1287 Pfam ABC-2 type transporter 393 473 IPR043926 GO:0140359
Sebi285g00069 1287 MobiDBLite consensus disorder prediction 1 34 - -
Sebi285g00069 1287 FunFam ABC transporter G family member 34 165 469 - -
Sebi285g00069 1287 Pfam Plant PDR ABC transporter associated 727 765 IPR013581 -
Sebi285g00069 1287 Pfam ABC transporter 178 360 IPR003439 GO:0005524
Sebi285g00069 1287 MobiDBLite consensus disorder prediction 1 24 - -
Sebi285g00069 1287 CDD ABCG_PDR_domain1 175 417 IPR034001 -
Sebi285g00069 1287 CDD ABCG_PDR_domain2 775 987 IPR034003 -
Sebi285g00069 1287 Pfam ABC transporter 780 932 IPR003439 GO:0005524
Sebi285g00069 1287 SMART AAA_5 187 419 IPR003593 GO:0016887
Sebi285g00069 1287 SMART AAA_5 789 981 IPR003593 GO:0016887
Sebi285g00069 1287 FunFam ABC transporter G family member 34 766 998 - -
Sebi285g00069 1287 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 765 1116 - -
Sebi285g00069 1287 Gene3D - 163 428 IPR027417 -
Sebi285g00069 1287 Gene3D - 763 998 IPR027417 -
Sebi285g00069 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 163 435 IPR003439 GO:0005524
Sebi285g00069 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 776 985 IPR027417 -
Sebi285g00069 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 435 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00069 Sebi-Chr285 799304 807769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00069 777 964 Calmodulin-binding Proteins AT2G36910 28.079 7.51e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00069 K08711 - qsa:O6P43_021928 1586.24