Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00058 ATGGTGATAATAAACCTTGGGAAGAAGATGAACCAGAGGGAGGGAACACGACTTGGGAAATACGAATTGGGTAGGACTCTTGGTGAAGGCAATTTTGGCAAAGTTAAGTTCGCCAGGAACACTGATTCTGGTCAATCTTTTGCCATTAAGATCATGGAGAAGAACAAAATCATCGATCTCAACATCACTAACCAGATAAAGAGGGAAATATCTGCCTTAAAGCTCCTCAGGCATCCCAATGTTGTTAAATTATACGAGGTCTTGGCTAGCAAAACAAAAATCTATATGGTACTTGAGTACGTGACTGGGGAGGAGTTATTCGATAAAATTGCATCCAAGGGTAAATTTACTGAAGGTGAAGGTAGAAAGTTGTTCCAACAGTTGATTGATGGTGTGAGCTACTGCCATAGTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTGCTTGTGGATACCAAAGGGAATATAAAGATAACCGATTTTGGCCTTAGTGCTTTACCTCAGCAATTTGGGATACCAAAATGGTTATCACCTGGTGCACAAAACATTATAAAGAGGATTCTTGATCCCAACCCTAAAACCAGGATAACAATGGCTGGGATCAAAGAAGATCCATGGTTTAAGAAGGGTTATACTCCAGCAGATCCAGAGGATGAGGAAGAGGACATATATATAGATGATGAAGCCTTTTCCATCAATGAATTGCCACATGAAGCAGAACAGAGGAATTCAGGATCACCAATCCGTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGGTTTACGTCAAATCTTTCAGCCAAAGATCTGATAGAGAAGATTGAGGACGCTGCAACAGAAATGGAATTTAGAGTCCAGAAGAAAAATGGCAAATTGAAAGTGATGCAAGACAACAAGGCGCATAAAACTCTAGGCAGCCTCTCAGTGACAGTAGAGGTGTTTGAAATAAGCCCATCATGGTATGTAGTGGAATTAAGGAAGTCTTATGGAGATGGCTCTGTATATAGACAGTTATGCAAGAAGTTGTTGAATGATTTGGGTGCTCCACCAAGGCATGCGCCAGTGAGCTCAGAAGTGAACTAG 1146 0.4127 MVIINLGKKMNQREGTRLGKYELGRTLGEGNFGKVKFARNTDSGQSFAIKIMEKNKIIDLNITNQIKREISALKLLRHPNVVKLYEVLASKTKIYMVLEYVTGEELFDKIASKGKFTEGEGRKLFQQLIDGVSYCHSKGVFHRDLKLENVLVDTKGNIKITDFGLSALPQQFGIPKWLSPGAQNIIKRILDPNPKTRITMAGIKEDPWFKKGYTPADPEDEEEDIYIDDEAFSINELPHEAEQRNSGSPIRINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSAKDLIEKIEDAATEMEFRVQKKNGKLKVMQDNKAHKTLGSLSVTVEVFEISPSWYVVELRKSYGDGSVYRQLCKKLLNDLGAPPRHAPVSSEVN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00058 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Sebi285g00058 381 Gene3D Kinase associated domain 1, KA1 248 369 - -
Sebi285g00058 381 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 171 352 - -
Sebi285g00058 381 SMART serkin_6 21 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi285g00058 381 Gene3D Transferase(Phosphotransferase) domain 1 12 170 - -
Sebi285g00058 381 ProSiteProfiles NAF domain profile. 247 271 IPR018451 GO:0007165
Sebi285g00058 381 FunFam Maternal embryonic leucine zipper kinase 13 173 - -
Sebi285g00058 381 Pfam Protein kinase domain 21 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi285g00058 381 ProSiteProfiles Protein kinase domain profile. 21 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi285g00058 381 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Sebi285g00058 381 Gene3D Transferase(Phosphotransferase) domain 1 171 247 - -
Sebi285g00058 381 FunFam Non-specific serine/threonine protein kinase 249 370 - -
Sebi285g00058 381 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Sebi285g00058 381 CDD CIPK_C 253 364 - -
Sebi285g00058 381 Pfam NAF domain 251 308 IPR004041 GO:0007165
Sebi285g00058 381 SUPERFAMILY Protein kinase-like (PK-like) 18 236 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00058 Sebi-Chr285 674131 678005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00058 16 369 CBL-interacting serine-threonine protein kinases AT1G01140 41.274 7.73e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi285g00058 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00058 K07198 - qsa:O6P43_021939 539.65