Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00051 ATGGTGGACCAGGCCAGCTTGGATGGAGATATTACTTCAACTGAGATGACAGGATCAACAAGTCATCCACCAGTTGAAGGTCCCGAAAATAACCAGGAAATGGCTGACAAGAAGCAGGATTTCAAGAAGAACGAGGCAAAGGACCAAAGCAACAAAACAGTACCCTTTTACATGCTTTTCTCATTTGCAGACTCTTGGGATTATCTGTTGATGTTCGTTGGGACAATAGGTGCTGTTGGGAATGGAATTTCCATGCCTTTAATGACTATAATCATTGGAGATGCAATTGATGCTTTTGGAGGAAATGCTGACACCAAACAAGTAGTTCATGAAGTTTCAAAGGAGTCTCTGGTGTTTGCATTCATGGGTGCAGAGGTGGCTTGCTGGGTGATCACTGGGGAGAGACAAGCTGCAAAAATAAGAGCCTTATACCTCAAAGCAATTCTGAGGCAAGATATCAGCTTCTTTGACAAGGAAATGAAGAGTGGTGAGGTTGTTGGAAGGATGTCAGGTGACACAGTTCTTATTCAAGATGCCATGGGGGAGAAGGTAGGAAAATTCATACAGTATGTGGCATCTTTTTTAGGAGGTTTAGTAGTAGCATTCATCAAGGGTTGGCTTCTAACCCTTGTCCTTCTATCTTCTCTTCCACTTCTTGTCCTCTCCGGTTCTGTGATGAGCTGTGCTTTTGCAAAGATGGCATCCCGTGGACAAGCAGCTTATTCTGAAGCAGCAACTGTAGTAGAGAGGACTATTGGTTCAATTCGAACTGTTGCATCATTTACTGGTGAGAAGCAAGCTATAACGCAATACAGTCAATATTTAACAAAAGCTTATAGAACTGGAGTGCAAGAGGGAGTGGCTGCTGGTTTAGGCCTTGGAACAGTTCGTTTATTTGTTTACAGTAGCTATGCTTTGGCTGTATGGTTTGGAGGGAAGATGGTACTGGAGAAAGGTTATACAGGAGGTCAAGTCATGAGTGTATTTTTTGCTGTACTAACTGGTTCCTTGTCTCTTGGACAGGCATCTCCAAGCTTAACTGCATTTGCTGCCGGACAAGCTGCTGCCTTTAAAATGTTTGAGACAATAAAGAGGCAGCCAAACATTGATGCTTATGACACTGCTGGTCAGCAGCTAGATGATATTTCTGGAGATATAGAACTTAGGGAGGTTTGCTTTAGTTATCCTTCAAGACCAAATGAAATGATATTCAATGGATTTTCTATTTCAATATCAAGTGGCACAACTGCAGCTTTAGTAGGGCAAAGCGGGAGTGGGAAATCAACAGTTATTAGTTTGATAGAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTCATTGATGGTGTCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTTGTCAGCCAGGAACCTGTCCTATTTACTTGTAGCATTAAAGAGAACATTGCCTATGGTAAGGATGGCGCAACAGATGAAGAAATCAAAGATGCAGCAGAACTTGCTAATGCTGCTAAATTCATAGATAAATTTCCCCATGGACTTGACACGATGGTTGGTGAGCATGGGACCCAGCTTTCTGGAGGTACACATGCTGAGCTCACTAAAGATCCTGATGGAGCTTATAGCCAGCTCATTAGGTTGCAAGAAATTAAAAGGGAATCAGAACAGCATGGTGCAAATGACTCGGCCAAGCTAGAGAACTTTGTGGATTCTGGAAGAGAATCAAGCCAACGGTTTTCTTTCCCTCGGTCTTTAAGCCGGGGATCATCTGGAATTGGAAACAGCAGTCGTCACTCATTCAGAATATCAAACGCTATGCCTACCACACCCAGTCTCTTGGAAGCATCAGAAGGAGGGCCTGAAGCTCTCCCTTCAGGAGCATCACATAAACCTCAAGATGCCCCATTTCTCCGCCTTGCTTATCTTAACAAGCCTGAAATCCCAGTGTTACTCATAGGTACTCTAGCTGCAGCAGTAACTGGGGCAATACAACCAACTCTGGGGCTTCTTGTGTCCAACATGATAAATACTTTCTTTGAGCCTGCAGATGAACTCCGCAAAGACTCAAAGTTTTGGGCATTAATATTTGTTGCCCTTAGTGTGGCTTGCTTCGTATTTCATCCATTGAGGTCCTACTTTTTTGCTGTAGCTGGTTCTAAGTTGATAAAAAGGATTCGGTTACTGTGCTTTGAGAAAATAACTCACATGGAAGTAGGCTGGTTTGATAAAGCTGAGCATTCAAGTGGAGCACTTGGAGCAAGGCTGTCAACTGACGCTGCTTCTATTCGAACTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAGATATTTCTACAGTAATTACAGCCTTGGTAATTGCCTTTGAGGCAAACTGGCAGCTTTCTCTCATCGTTCTTGTTTTGCTACCTCTACTATTAGTAAATGGACATGTGCAAATCAAGTCCATGCAAGGTTTCAGCACAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCGAATGATGCAGTGGGGAATATCAGAACAGTTGCCGCTTTCTGTGCTGAAGAGAAGATGATGGAGTTATACCAGAAGAAATGTGTAGGACCAATCCAGACAGGTGTAAGGCAGGGTTTGGTCAGCGGAACCGGTTTTGGTTTATCACTCTTCTTTCTGTTCTCTGTCTATGCATGCAGTTTTTATGCCGGAGCCCGACTTGTTGAGAATGGCAAAGCATCAATCTCAGATGTTTTCCGTGTATTTTTCTCTCTTACAATGGCAGCTATAGCATTATCTCAATCTGGCTTCATGATCCCAGGGGCAAGTAAGGCAAGAAGTTCTGCTGCTTCTATATTTGCTATTCTTGATCAGAAATCAAAAATAGATTCCAGTGATGAGTCTGGAATGACATTGCAAGATGTGAAGGGAGAAATTGAGTTCCACCATGTTGCTTTCAAGTATCCAACCAGGCCTAATGTTCCTATATTCAGAGATCTTTCCTTGACCATTCATTCAGGACAGACAGTTGCTCTAGTAGGTGAAAGTGGAAGTGGAAAGTCAACAGTGATCTCATTGTTGCAAAGATTTTATGACCCAGATTCAGGTCAGATTAAATTGGATGGGACAGAAATCCAAAAGCTACAACTTAAATGGTTTAGGCAGCAGATGGGCCTGGTAAGCCAGGAGCCAGTGTTGTTTAATGACACCATCCGAGCCAATATTGCATATGGAAAAGGAGGAGATGCTACAGAGGCTGAAATTATAGCTGCAGCAGAACTGGCAAATGCACACAAGTTCATTAGCAGTTTGCAGCAGGGTTATGATACTGTAGTAGGGGAGAGAGGAATTCAACTATCAGGAGGGCAGAAGCAGAGGGTGGCAATTGCAAGAGCCATAGTTAAGAGTCCAAAAATATTACTACTAGATGAAGCCACTAGTGCACTTGATGCTGAATCAGAAAAAGTGGTCCAGGATGCACTTGACAGAGTGAGGGTGGATAGAACCACAATTGTGGTGGCCCACAGGTTATCCACCATAAAGGGTGCAAGTTCAATTGCAGTGGTTAAAAATGGGGTCATTGCAGAGAAAGGGAAGCATGACACTTTGCTCAACAAGGGTGGTACCTATGCTTCCTTAGTAGCACTGCACACAAGTGCTTCTTCATCTTAG 3651 0.4314 MVDQASLDGDITSTEMTGSTSHPPVEGPENNQEMADKKQDFKKNEAKDQSNKTVPFYMLFSFADSWDYLLMFVGTIGAVGNGISMPLMTIIIGDAIDAFGGNADTKQVVHEVSKESLVFAFMGAEVACWVITGERQAAKIRALYLKAILRQDISFFDKEMKSGEVVGRMSGDTVLIQDAMGEKVGKFIQYVASFLGGLVVAFIKGWLLTLVLLSSLPLLVLSGSVMSCAFAKMASRGQAAYSEAATVVERTIGSIRTVASFTGEKQAITQYSQYLTKAYRTGVQEGVAAGLGLGTVRLFVYSSYALAVWFGGKMVLEKGYTGGQVMSVFFAVLTGSLSLGQASPSLTAFAAGQAAAFKMFETIKRQPNIDAYDTAGQQLDDISGDIELREVCFSYPSRPNEMIFNGFSISISSGTTAALVGQSGSGKSTVISLIERFYDPQAGEVLIDGVNLREFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIKDAAELANAAKFIDKFPHGLDTMVGEHGTQLSGGTHAELTKDPDGAYSQLIRLQEIKRESEQHGANDSAKLENFVDSGRESSQRFSFPRSLSRGSSGIGNSSRHSFRISNAMPTTPSLLEASEGGPEALPSGASHKPQDAPFLRLAYLNKPEIPVLLIGTLAAAVTGAIQPTLGLLVSNMINTFFEPADELRKDSKFWALIFVALSVACFVFHPLRSYFFAVAGSKLIKRIRLLCFEKITHMEVGWFDKAEHSSGALGARLSTDAASIRTLVGDALGLLVQDISTVITALVIAFEANWQLSLIVLVLLPLLLVNGHVQIKSMQGFSTDAKKLYEEASQVANDAVGNIRTVAAFCAEEKMMELYQKKCVGPIQTGVRQGLVSGTGFGLSLFFLFSVYACSFYAGARLVENGKASISDVFRVFFSLTMAAIALSQSGFMIPGASKARSSAASIFAILDQKSKIDSSDESGMTLQDVKGEIEFHHVAFKYPTRPNVPIFRDLSLTIHSGQTVALVGESGSGKSTVISLLQRFYDPDSGQIKLDGTEIQKLQLKWFRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTVVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESEKVVQDALDRVRVDRTTIVVAHRLSTIKGASSIAVVKNGVIAEKGKHDTLLNKGGTYASLVALHTSASSS 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00051 1216 SUPERFAMILY ABC transporter transmembrane region 638 952 IPR036640 GO:0005524|GO:0016020
Sebi285g00051 1216 MobiDBLite consensus disorder prediction 576 629 - -
Sebi285g00051 1216 FunFam ABC transporter B family member 1 630 935 - -
Sebi285g00051 1216 ProSitePatterns ABC transporters family signature. 1112 1126 IPR017871 GO:0005524|GO:0016887
Sebi285g00051 1216 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 972 1209 IPR003439 GO:0005524
Sebi285g00051 1216 Gene3D ABC transporter type 1, transmembrane domain 589 775 IPR036640 GO:0005524|GO:0016020
Sebi285g00051 1216 MobiDBLite consensus disorder prediction 31 47 - -
Sebi285g00051 1216 MobiDBLite consensus disorder prediction 576 611 - -
Sebi285g00051 1216 CDD ABC_6TM_Pgp_ABCB1_D2_like 640 955 - -
Sebi285g00051 1216 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 351 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi285g00051 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 961 1209 IPR027417 -
Sebi285g00051 1216 Gene3D - 376 529 IPR027417 -
Sebi285g00051 1216 Gene3D - 962 1211 IPR027417 -
Sebi285g00051 1216 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 347 - -
Sebi285g00051 1216 CDD ABC_MTABC3_MDL1_MDL2 972 1207 - -
Sebi285g00051 1216 Pfam ABC transporter transmembrane region 650 922 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi285g00051 1216 Pfam ABC transporter transmembrane region 71 337 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi285g00051 1216 MobiDBLite consensus disorder prediction 7 27 - -
Sebi285g00051 1216 MobiDBLite consensus disorder prediction 1 47 - -
Sebi285g00051 1216 Pfam ABC transporter 405 530 IPR003439 GO:0005524
Sebi285g00051 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 531 IPR027417 -
Sebi285g00051 1216 SUPERFAMILY ABC transporter transmembrane region 59 370 IPR036640 GO:0005524|GO:0016020
Sebi285g00051 1216 Gene3D ABC transporter type 1, transmembrane domain 58 375 IPR036640 GO:0005524|GO:0016020
Sebi285g00051 1216 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 386 697 IPR003439 GO:0005524
Sebi285g00051 1216 Pfam ABC transporter 991 1140 IPR003439 GO:0005524
Sebi285g00051 1216 PANTHER ABC TRANSPORTER B FAMILY 630 1209 IPR039421 -
Sebi285g00051 1216 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 651 937 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi285g00051 1216 SMART AAA_5 413 697 IPR003593 GO:0016887
Sebi285g00051 1216 SMART AAA_5 999 1192 IPR003593 GO:0016887
Sebi285g00051 1216 FunFam ABC transporter B family member 9 58 382 - -
Sebi285g00051 1216 FunFam Uncharacterized protein 936 962 - -
Sebi285g00051 1216 FunFam ABC transporter B family member 1 962 1211 - -
Sebi285g00051 1216 Gene3D ABC transporter type 1, transmembrane domain 868 1213 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00051 Sebi-Chr285 591807 597890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00051 618 1216 Calmodulin-binding Proteins AT2G36910 37.785 2.53e-123 410