Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00043 ATGGCGTCATTGACAATGGGGGATGAGGTGGTGTTGTTGGATTTCAATGTCAGTATGTTTGGGATGAGAGTGAGGGTTGCACTGGCAGAGAAAGGGATAAAGTATGAGTACAGGGAGGAGGATCTGATGAACACCAAGAGTGCATTGCTTCTGCAAATGAACCCTGTTCACAAGAAAATTCCAATCCTTATCCATAATGGAAAGCCCATTTGTGAATCTCTCATTATTGTTGAGTATATTGATGAGGTTTGGAAGGATAAAGCTCCCTTGTTGCCCATTGATCCATACCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAACTTGAGACAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGGTGACACATTTGGGTTTCTTGATGTTGCTTTCATTCCTTTCTATAAATGGTTTTATGCTTATGAGACGGTTGGCAAATTGAAGTTGGACTGCCCAAAACTCATTGCATGGGGAAAGAGATGCTTGCAGAGAGAAAGTGTGTCCAAATTTCTTGCGGACGAAAAGGAGATCTATGAGTTTGTTCTGAGCTACAGGAAAATAATTGGAGTGGACCAAGACACCAAAACCAACTGA 690 0.4203 MASLTMGDEVVLLDFNVSMFGMRVRVALAEKGIKYEYREEDLMNTKSALLLQMNPVHKKIPILIHNGKPICESLIIVEYIDEVWKDKAPLLPIDPYQRAQARFWADFVDNKVHEVAKKIWTGKVDELETEKKELIENLKQLEEFLGDKPYFGGDTFGFLDVAFIPFYKWFYAYETVGKLKLDCPKLIAWGKRCLQRESVSKFLADEKEIYEFVLSYRKIIGVDQDTKTN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00043 229 CDD GST_N_Tau 10 84 - -
Sebi285g00043 229 SFLD Main.3: Omega- and Tau-like 7 223 IPR045073 -
Sebi285g00043 229 CDD GST_C_Tau 95 216 IPR045074 GO:0004364|GO:0006749
Sebi285g00043 229 Pfam Glutathione S-transferase, N-terminal domain 15 82 IPR004045 -
Sebi285g00043 229 Gene3D - 94 223 - -
Sebi285g00043 229 SFLD Main (cytGST) 7 223 - -
Sebi285g00043 229 SUPERFAMILY Thioredoxin-like 10 112 IPR036249 -
Sebi285g00043 229 SUPERFAMILY GST C-terminal domain-like 82 220 IPR036282 -
Sebi285g00043 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 216 IPR010987 -
Sebi285g00043 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 88 IPR004045 -
Sebi285g00043 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 15 211 IPR045073 -
Sebi285g00043 229 FunFam Glutathione S-transferase U20 94 223 - -
Sebi285g00043 229 Gene3D Glutaredoxin 6 93 - -
Sebi285g00043 229 FunFam Tau class glutathione S-transferase 5 93 - -
Sebi285g00043 229 Coils Coil 117 144 - -
Sebi285g00043 229 Pfam Glutathione S-transferase, C-terminal domain 131 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00043 Sebi-Chr285 522451 523338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00043 6 223 Glutathione S-transferase Gene Family AT1G17180 62.727 9.18e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00043 K00799 - gmx:100781460 366.311