Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00040 ATGGGGGATGAGGTGGTGTCATTGGGTTTCAGTCTCAGTATGTTTGGGGGAAGAGTGAGGATTGCACTGGCAGAGAAAGGGATTAAGTATGAGTACATGGATGTGGATTTTGTGAACACCAAGAGTGCATTGCTTCTGCAAATGAACCCCGTTCACAAGAAAATCCCTGTCCTTATCCATAATGGGAAGCCCATTTGTGAATCCCTCATTATTGTTGAGTATATTGATGAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAACATGAGAAAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGATAACACATTTGGGTTTCTTGATGTTGCTTTCATTCCTTTCTATAAATGTTTTTATGCTTATGAGGCATTTGGAAAATCGAAGTTAGACTGCCCAAAACTCACTGCATGGGGAAAGAGATGCTTGCAGAGAGAAAGTGTGTCCAAATTCCTTTCGGACGAAAAAGAGATCTATGAGTTTGTTCTGAGCTACAGGAAAAAAATTGGAGTGGACAAAGACACCAAAGCCAACTAA 588 0.4082 MGDEVVSLGFSLSMFGGRVRIALAEKGIKYEYMDVDFVNTKSALLLQMNPVHKKIPVLIHNGKPICESLIIVEYIDEVHEVAKKIWTGKVDEHEKEKKELIENLKQLEEFLGDKPYFGDNTFGFLDVAFIPFYKCFYAYEAFGKSKLDCPKLTAWGKRCLQRESVSKFLSDEKEIYEFVLSYRKKIGVDKDTKAN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00040 195 CDD GST_C_Tau 74 182 IPR045074 GO:0004364|GO:0006749
Sebi285g00040 195 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 177 IPR045073 -
Sebi285g00040 195 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Sebi285g00040 195 Pfam Glutathione S-transferase, C-terminal domain 89 163 IPR004046 -
Sebi285g00040 195 Gene3D - 76 189 - -
Sebi285g00040 195 Coils Coil 83 110 - -
Sebi285g00040 195 CDD GST_N_Tau 5 78 - -
Sebi285g00040 195 SUPERFAMILY Thioredoxin-like 9 81 IPR036249 -
Sebi285g00040 195 SUPERFAMILY GST C-terminal domain-like 78 186 IPR036282 -
Sebi285g00040 195 Pfam Glutathione S-transferase, N-terminal domain 14 77 IPR004045 -
Sebi285g00040 195 FunFam Tau class glutathione S-transferase 1 87 - -
Sebi285g00040 195 Gene3D Glutaredoxin 3 75 - -
Sebi285g00040 195 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 28 188 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00040 Sebi-Chr285 508157 509003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00040 1 189 Glutathione S-transferase Gene Family AT1G17180 51.364 8.18e-69 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00040 K00799 - sly:101244013 220.705