Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi285g00036 | ATGGAAGGTGAAGTTGCAATGAAAAAATGGCTGCAAGTTGAGGAAAGGCTAGATGATGATAAAAAAGGACAAAGGGAGGATGACATGAAGAAAGCAGAGGAAGCAAAAATCATAGAAGATGGAGCATCTGAGGCTTCTTGCAGGAAAGCCAGAGTGTCCATAAGGGCACGATCAGATTTTTCTTTGATGGGTGATGGGTGTCGATGGAGAAAGTATGGACAAAAGATAGCAAAGGGTAACCCTTGTCCCCGGGCCTACTATCGCTGCAACATGGGAACGGCATGTCCAGTTCGTAAGCAGGTTCAAAGGTGTGCAATGGATGAGAGTGTTTTCATCACAACCTATGAGGGTAATCATAATCATTCACTCCCACCAGAAGCCAGATCCATGGCCAGCACAACATCAGCAGCATTAAACATGTTCCTTTCTGGTTCAACCACTAGTACTTTCCATAGCAGCACTCTATCAAACTCAGGCCTCTTCTCTTCATCATCTACTAGTAATTCCTCTGCCTCCACTACTGCTAGTTTGGCTTCCTTCTATCCATCTCCATCATGTCCCACTTTAACATTGGACTTAACCCACCCCTCTAATAACTACTTGAAACTCCAAAGGCCTATTTCTTCAAACCATTGGCAACCATTTCCTGTTTCATTGCATGGTCACTGTACTACTCGTGAGGGAGGACTGCACTACTTGTCTTCTAAGCTTCCAACCGTGACACCCTCAGAGAAAAACCTTGCCTTGGTGGATGTTATCAGTGCAGCTATAATCAAGGATCCTTCTATTAAGGCAGTGTTAGATGCAGTAGTTTCCTCCTCAGTGGAGACACTACTCAGAACATCACCCAACTTAGTAGATCGAGTGAATATGGGTTATGACCCTTCTTCTAATTAG | 897 | 0.4426 | MEGEVAMKKWLQVEERLDDDKKGQREDDMKKAEEAKIIEDGASEASCRKARVSIRARSDFSLMGDGCRWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAMDESVFITTYEGNHNHSLPPEARSMASTTSAALNMFLSGSTTSTFHSSTLSNSGLFSSSSTSNSSASTTASLASFYPSPSCPTLTLDLTHPSNNYLKLQRPISSNHWQPFPVSLHGHCTTREGGLHYLSSKLPTVTPSEKNLALVDVISAAIIKDPSIKAVLDAVVSSSVETLLRTSPNLVDRVNMGYDPSSN | 298 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi285g00036 | 298 | FunFam | probable WRKY transcription factor 31 | 48 | 125 | - | - | |
Sebi285g00036 | 298 | Pfam | WRKY DNA -binding domain | 65 | 121 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi285g00036 | 298 | ProSiteProfiles | WRKY domain profile. | 58 | 124 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi285g00036 | 298 | SUPERFAMILY | WRKY DNA-binding domain | 56 | 124 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi285g00036 | 298 | Gene3D | WRKY domain | 47 | 125 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Sebi285g00036 | 298 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 25 | 275 | IPR044810 | GO:0003700 | |
Sebi285g00036 | 298 | SMART | WRKY_cls | 63 | 123 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi285g00036 | Sebi-Chr285 | 484976 | 489783 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi285g00036 | 35 | 194 | WRKY Transcription Factor Family | AT4G04450 | 57.143 | 4.49e-59 | 193 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Sebi285g00036 | WRKY | 7.5e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi285g00036 | - | - | gmx:100797109 | 290.041 |