Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00025 ATGGCTACTTCATCTCCTAAACTCTTTCTCCTTCTCTTAACAATCTTCTCACATACTTTGGCTGTTAACTCCAAAAATGCTTCTACAACAACATTGCATGCAAACCTCTCTTCCTTAAAATCTCTCTGCAGAACCACCCCATACCCTGAAGCTTGCTTCAATTCATCAAAGCTGACAATCTCAATAAACATAAATCCAAACATCATCAACATCCTTCTTCAGTCCCTCCAAGTAGCAATATCTGAAGCCACAAAACTATCTGATCTATTCAACAATGCTGGATCCTCAAACATCATTGAGAACAAAAGAGGAGCAGTCCAAGACTGTAGAGAACTCCAACAATCCACCTTGACTTCCTTAAAAAGATCAGAATCTGGGGTTCGTTCCCAAAACACAAGGAAGTTAGTTGATGCAAGAGCCTACCTCAGTGCAGCCCTCACCAACAAGAACACATGTCTAGAAAGCTTAGATTCTGCTTCAGGTACCATGAAGCCAGTTCTAGTGAATTCTGTGATCAATTCTTACAAGCATGTCAGTAATTCTCTTTCAATGCTCCCTAAGCCTGAAATGAAGGCTCCCAAAGGACTCAAGAACCGGCGTTTAATGGATGCTCCAACATGGTTGTCAAGCAAAGACCTTCGCTTCTTACAAAACACTGATGAAGCTCCTGTGCTTGTTGTGGCTAAAGATGGAACAGGGAACTTTAGTACTATCACTGAAGCCATCAACTTTGCTCCAAATAACAGCTTTGATAGGACAATAATCTATGTCAAAGAAGGGGTATATGAGGAAAATGTGGAAATCCCAAGTTATAAGACAAATATTGTTCTGCTTGGAGATGGAAAGGATGTCACTTTCATTACTGGCAGTAGAAGTGTCATTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCTGTCTCTGGGGAGGGCTTTTTGGCACGTGATATAGCTATTGAGAACAAGGCAGGGCCAGAGAAGCATCAAGCAGTTGCCTTGAGAGTGAATGCAGACTTGACTGCTTTTTACAGGTGTGCCATGTGTGGTTTTCAAGACACTCTTTATGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTTTGGGACTATAGATTTCATATTTGGGAATGCTGCAGTGGTTTTACAGGCATGTAACATAGTGTCTAGAAAGCCAATGCCTGGCCAATTCACTGTTATCACTGCACAGTCCAGAGATTCCCCTGATGAGGACACTGGCATCTCAATCCAAAACTGTTCAATTTTAGCTACTACTGATTTGTATTCCAGCTCTAGCAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTCTATTCTCGCACTGTTTACCTTCAGTCCTACATTGATATGTTTATTGATCCAACAGGGTGGACAAAATGGAATGATGATGAAGGCTTGGACACTTTGTATTATGGAGAGTTTGCAAATTATGGGCCTAGTTCAGGGACAGATAAGCGAGTAAAATGGCCTGGGTACCATTTAATGGATTACAATAGTGCCTATAACTTCACAGTCTCAGAGTTCATTATTGGTGATGCTTGGCTTGGGTCAACTTCTTTCCCTTATGATAATGGGATTTAA 1605 0.4156 MATSSPKLFLLLLTIFSHTLAVNSKNASTTTLHANLSSLKSLCRTTPYPEACFNSSKLTISININPNIINILLQSLQVAISEATKLSDLFNNAGSSNIIENKRGAVQDCRELQQSTLTSLKRSESGVRSQNTRKLVDARAYLSAALTNKNTCLESLDSASGTMKPVLVNSVINSYKHVSNSLSMLPKPEMKAPKGLKNRRLMDAPTWLSSKDLRFLQNTDEAPVLVVAKDGTGNFSTITEAINFAPNNSFDRTIIYVKEGVYEENVEIPSYKTNIVLLGDGKDVTFITGSRSVIDGWTTFRSATLAVSGEGFLARDIAIENKAGPEKHQAVALRVNADLTAFYRCAMCGFQDTLYVHSFRQFYRECDIFGTIDFIFGNAAVVLQACNIVSRKPMPGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYSSSSSFKSYLGRPWRVYSRTVYLQSYIDMFIDPTGWTKWNDDEGLDTLYYGEFANYGPSSGTDKRVKWPGYHLMDYNSAYNFTVSEFIIGDAWLGSTSFPYDNGI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00025 534 PANTHER PECTINESTERASE 17 524 - -
Sebi285g00025 534 FunFam Pectinesterase 218 534 - -
Sebi285g00025 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Sebi285g00025 534 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Sebi285g00025 534 SUPERFAMILY Pectin lyase-like 222 531 IPR011050 -
Sebi285g00025 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Sebi285g00025 534 NCBIfam pectinesterase inhibitor domain 10 184 IPR006501 GO:0004857
Sebi285g00025 534 ProSitePatterns Pectinesterase signature 2. 368 377 IPR033131 -
Sebi285g00025 534 SMART PMEI_2 34 184 IPR006501 GO:0004857
Sebi285g00025 534 Pfam Pectinesterase 225 520 IPR000070 GO:0030599|GO:0042545
Sebi285g00025 534 CDD PMEI-like_3 41 184 - -
Sebi285g00025 534 Gene3D - 219 534 IPR012334 -
Sebi285g00025 534 FunFam Pectinesterase 35 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00025 Sebi-Chr285 259860 261789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00025 31 534 Carbohydrate Esterase AT2G26440 66.667 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00025 - - gmx:100776969 822.002