Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00023 ATGAATTGCTTTGTCTTGCTGGGTCATTGTGCTAGGCCTAGACTGCAGAGCACAGAAGAGGGAGAGGATTTGGTTACAGCAACATGCAAGCACACCCTTTATTTTGAAGTATGTGTTTCTTCCTTAAGATCAGTTCCTAGTAGCAACACATCAGATCTCAAAATGCTTGCTGAGATTGCTTTAAATCTGAGCAAAACATATGCTACAAAGACACTGTCCTGTGTATATGAGTTGAAGTCTTCTGCAGCCAATGGTACCAATAGCAGTTACACGTCCCGTTGCTTAAGTGACTGTGAAGAGGAATACTCAGAAGCCATAGATAATTTGCAGGACTCAGAAGAAGCACTTGCTAATGGAGATTATGACAAAGTAGATACATTGGTTTCAGCTGCTATGTCAGATGCTGAGACATGTGAGGATGGCTTCAAAGACATGCTTAGTGATGACAATGGTTCCAACTCTCCTCTTTCTGAGCGTAACCGTTACTTCTCTGAATTGTGTAGTAATGCTTTAGCCATTACAAAACTATTAGCTTGA 537 0.4115 MNCFVLLGHCARPRLQSTEEGEDLVTATCKHTLYFEVCVSSLRSVPSSNTSDLKMLAEIALNLSKTYATKTLSCVYELKSSAANGTNSSYTSRCLSDCEEEYSEAIDNLQDSEEALANGDYDKVDTLVSAAMSDAETCEDGFKDMLSDDNGSNSPLSERNRYFSELCSNALAITKLLA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00023 178 Pfam Plant invertase/pectin methylesterase inhibitor 23 173 IPR006501 GO:0004857
Sebi285g00023 178 Coils Coil 95 115 - -
Sebi285g00023 178 SMART PMEI_2 20 173 IPR006501 GO:0004857
Sebi285g00023 178 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 177 IPR035513 -
Sebi285g00023 178 CDD PMEI-like_1 24 177 - -
Sebi285g00023 178 NCBIfam pectinesterase inhibitor domain 3 177 IPR006501 GO:0004857
Sebi285g00023 178 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 178 IPR035513 -
Sebi285g00023 178 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 178 - -
Sebi285g00023 178 FunFam Invertase/pectin methylesterase inhibitor family protein 20 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00023 Sebi-Chr285 252733 253269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00023 24 175 Carbohydrate Esterase AT1G53830 27.500 2.08e-09 53.9