Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi285g00005 ATGGAGGATGCTGCTGGAGGGTCCAAATTAACTGGAAATTGGCAAATTGCAAGACTAAAGGAAATATTCCAGAAGTGGCAAACTGTGACCCTGGGCTCAAAAGAGTCCAATAACCATTCTGGTGTGAATCATGGGGGCATATCTCCAATGATTAATAAAAGGTTAACCAATCTTGTGTATTGTGATTCGGATGAAGATAGCTGCTATAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCTGTCTATGTAGGACCAGAGCTTCGGAGGTTCATTATTCCCACAAGCTACCTTAGTCACTCTCTGTTCAAAGTGTTGCTGGAAAAGGCTGCTGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAGACCTTTAAATACCTCCTGAACTGCATGGAGAACCATCAGCACCATGATGACAATTCCTCCGGAAACACAGGAACTGTTGAAGAGTAA 480 0.4375 MEDAAGGSKLTGNWQIARLKEIFQKWQTVTLGSKESNNHSGVNHGGISPMINKRLTNLVYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHQHHDDNSSGNTGTVEE 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi285g00005 159 Pfam Auxin responsive protein 68 139 IPR003676 GO:0009733
Sebi285g00005 159 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 57 136 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi285g00005 Sebi-Chr285 28235 28915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi285g00005 3 159 Calmodulin-binding Proteins AT3G43120 66.250 9.34e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi285g00005 K14488 - gmx:100795275 282.337