Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00063 ATGCACATTCTCAAATCTCAACAATGCATATCAGTGATCTCAAATGCTTGTTACTTGAGTGTTTCTTTTACTTCTTTTGAACTGTGCTACTTGCCATATATCTGGAGTCACAGAAAGGTAGCACAAGAGTGGCCTGGACTACCTAAAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTGCAGGAAATTCAAAACCCCACCCTTTCATAGATGAATTTATTACTACTCTTGAAGTGGAAGATGGCATTTGTTATACTCATCCTCAACATTTACCAGGTGTCAAGCAAGATGGAAGTGCTTCCCACTTTTTCCATAGAGCAATCAAAGCTTATAATACTGGCAGTCGAAAGCGTCGAAAAATATATGGACAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAAGACTAAACCTGTCATCATGAATGGGGTTCAAAAAGGCTGTAAAAAAATTATGGTTCTGTATATGATCCTGGTTAGGGGAGGAAAAGCTGAGAAAACTAATTGGGTTATGCATCAATATCATCTAGGAACAGAAGAGGATGAAAAGGATGGAGAGTATGTTATCTCTAAAGTGTTTTACCAGCAGCAGCAGATCAAATTGGGTGAAAAGGATGATCAGGATATTCCTGAAACCACTGAAGCAACTACTGTGAAAGTGGATCCAGTTATTGAAAAAGATGAGCAGGATATTCCTGAAACCACCGAAGCAACTATCGTGAAAGTGGATCCAATTACTCCCAAATCTGTCACTCCTGAACCCCCTCGTAATGAAAAACGATGTTCAGATCTAGATCCAGAACAAGAATCACATCATATTCCTCAGTTTGATGGTCTAGATAATATTCGGGCTGGCTGTGAAGAGTTTGCAAAAAATGATCAATCAATGGTAGAAACTCATAATAATGAAGGGATAGATAGTATAGAAAATAATGTTAATGAAGACTCAAAATGGTGGGATAGTGAGTCACAGAATCTGTTGGATTCACAGCAACTTGTTGAAGCATTGTCCTTGTGTGATGATCTCCTTCAAAGCCAGTCTCCCAATAGGGATGGTGAAAATGGAGAACATAAGGAGCGACCTAGTCTTTCTGTATATGCTCATCTAGGACCAGAGCATCTGAAGAAAGATATTGAAGATTGCCAAAATCTTGTCCTTGATACTACAAATGTAGGGCTTGAGACGCCACCTTCAGAGTTTCGACTAAGTCAGCTGGAATTCAGCTCACAGGATAGCTTTATTTCCTGGGGTGGCAACAAGGCAGTCAACTAA 1302 0.3978 MHILKSQQCISVISNACYLSVSFTSFELCYLPYIWSHRKVAQEWPGLPKGVKFDPSDQEIIWHLLAKVGAGNSKPHPFIDEFITTLEVEDGICYTHPQHLPGVKQDGSASHFFHRAIKAYNTGSRKRRKIYGQDFGDVRWHKTGKTKPVIMNGVQKGCKKIMVLYMILVRGGKAEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQQIKLGEKDDQDIPETTEATTVKVDPVIEKDEQDIPETTEATIVKVDPITPKSVTPEPPRNEKRCSDLDPEQESHHIPQFDGLDNIRAGCEEFAKNDQSMVETHNNEGIDSIENNVNEDSKWWDSESQNLLDSQQLVEALSLCDDLLQSQSPNRDGENGEHKERPSLSVYAHLGPEHLKKDIEDCQNLVLDTTNVGLETPPSEFRLSQLEFSSQDSFISWGGNKAVN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00063 433 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 37 392 IPR044799 GO:0003700
Sebi284g00063 433 MobiDBLite consensus disorder prediction 252 284 - -
Sebi284g00063 433 Pfam No apical meristem (NAM) protein 48 186 IPR003441 GO:0003677|GO:0006355
Sebi284g00063 433 ProSiteProfiles NAC domain profile. 47 205 IPR003441 GO:0003677|GO:0006355
Sebi284g00063 433 FunFam NAC domain-containing protein 8 56 209 - -
Sebi284g00063 433 MobiDBLite consensus disorder prediction 263 284 - -
Sebi284g00063 433 MobiDBLite consensus disorder prediction 354 373 - -
Sebi284g00063 433 Gene3D NAC domain 56 210 IPR036093 GO:0003677|GO:0006355
Sebi284g00063 433 SUPERFAMILY NAC domain 35 205 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00063 Sebi-Chr284 1171978 1174278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00063 42 212 NAC Transcription Factor Family AT1G28470 62.209 1.26e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi284g00063 NAM 1.1e-20 No_clan