Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00061 ATGTCTTCTTATAGGATGTGTAGAGCTTTGATGCCTGGAGATGATGAAAATTTGACTGATGAAGCAGTATGGGAAACTCTTCCTCACTTCTGGATTTCGATATCCATGGTCTTCTTTATTGCTGCTACAGTGTTCACCCTTCTAAAGATAACCGGTGATGTTGCTGCACTAGGCTGGTGGGACTTATTTATTAACTTCGGTGGAGATATTCCTAGAAGCTACACATCTATAGCATCTAAATCCCGTGACTGCTTTGGGTTCTTGCATCGTGGGCCAAGATTGCTAGGTTGGTGGTCAATAGATGAAGGAAGTAAAGAGGAAGAAGCAAGACTTTATTGTGCTGGGAGTTCTGGGTATAATACTTTCTCTCCTGATACAGTGAAGAAAATGCCTAGAGCAGATCTTGTTGAAGAGGAGAAGATCTTATGTAGAGTATGCTTCGAAGAGCAGATTAATGTGGTCCTACTTCCCTGCAAGCATCACATTCTTTGCCACACTTGCTGCGAAAAATGCAAAAGGTGCCCTGTCTGCCGTGGCACCATTGAAGAACGGATGCCTGTATATGATGTGTAG 573 0.4311 MSSYRMCRALMPGDDENLTDEAVWETLPHFWISISMVFFIAATVFTLLKITGDVAALGWWDLFINFGGDIPRSYTSIASKSRDCFGFLHRGPRLLGWWSIDEGSKEEEARLYCAGSSGYNTFSPDTVKKMPRADLVEEEKILCRVCFEEQINVVLLPCKHHILCHTCCEKCKRCPVCRGTIEERMPVYDV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00061 190 Pfam Transmembrane Fragile-X-F protein 4 66 IPR019396 -
Sebi284g00061 190 SUPERFAMILY RING/U-box 123 186 - -
Sebi284g00061 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 190 IPR013083 -
Sebi284g00061 190 Pfam Zinc finger, C3HC4 type (RING finger) 141 183 - -
Sebi284g00061 190 ProSiteProfiles Zinc finger RING-type profile. 143 178 IPR001841 -
Sebi284g00061 190 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 71 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00061 Sebi-Chr284 1131643 1135993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00061 67 190 C3H Transcription Factor Family AT1G73950 53.247 1.96e-48 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00061 - - gmx:113000756 231.106