Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00059 ATGATACAGGAAGATCATCAAGGACAGTGTTCTTCTCAAACCATCAACAACTTTCAAACCTATCAAGAGCAGTTTCTCCTTCAACAACAGATGACACAACAAAACGGTGGTGATTTCTATGGTGGAGGAGGAGGAAGAGTTGGCTTCAATATGTTTCCTTCTAATAGTGAAGTTTTGCAACCATGGTGTATGCCTCATCATCAGGTTCACCCTTTCAACCCTGTGAGAGAGCATGATCCATTTGTTGTCCCTTCTTCACCTTATGCAAGTTTGTTCAATAGAAGGGTTCCTTCTCTTCAGTTTGCATATGAGGGTCCATCATCTTCTGATCTGAGGATCATATCAGATACCCTTGGAGTTGCAGGTTCATCAGCACCTTTTGGTCTCCAAGCTGAGCTGGGAAAGATGACTGCTCAAGAAATCATGGAAGCTAAGGCTCTTGCAGCATCCAAGAGTCACAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTTGCTAAGCTCCGCAGCTTGTTGCCCAACACTACCAAAACAGATAAAGCATCATTGCTAGCAGAAGTGATTCAACATGTGAAGGAATTGAAGCGACAAACTTCATTGATAGCAGAAACGAGTCCAGTTCCTACGGAGGCTGATGAGTTAACAGTGGATGCAGCTGATGAAGATGGCAAGTTTATCATCAAAGCCTCACTTTGCTGTGAAGATAGGTCAGATCTCTTACCTGAACTCATCAAGGCATTGAAAGCATTAAGGTTAAGAACCCTCAAAGCTGAGATCACAACGCTTGGTGGTCGTGTCAAGAATGTGTTGTTCATCACTGGGGATGATGAAGATTCAAGTAGCAATGATGAGGAGCATAGTCACCACCAACAGCAATATTGTATTAGTTCAATACAAGAAGCACTTAAGGCAGTGATGGAGAAGAGTGTTGGGGATGAGTCTGCAGCTTCTGGAAATGTCAAGAGACAAAGGACCAATATAATTTCAATATCCTAG 1005 0.4289 MIQEDHQGQCSSQTINNFQTYQEQFLLQQQMTQQNGGDFYGGGGGRVGFNMFPSNSEVLQPWCMPHHQVHPFNPVREHDPFVVPSSPYASLFNRRVPSLQFAYEGPSSSDLRIISDTLGVAGSSAPFGLQAELGKMTAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEADELTVDAADEDGKFIIKASLCCEDRSDLLPELIKALKALRLRTLKAEITTLGGRVKNVLFITGDDEDSSSNDEEHSHHQQQYCISSIQEALKAVMEKSVGDESAASGNVKRQRTNIISIS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00059 334 Pfam Helix-loop-helix DNA-binding domain 151 197 IPR011598 GO:0046983
Sebi284g00059 334 CDD bHLH_AtAIG1_like 143 221 - -
Sebi284g00059 334 Gene3D - 143 204 IPR036638 GO:0046983
Sebi284g00059 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
Sebi284g00059 334 SMART finulus 154 203 IPR011598 GO:0046983
Sebi284g00059 334 PANTHER TRANSCRIPTION FACTOR BHLH30 31 329 IPR045847 GO:0003700|GO:0006355
Sebi284g00059 334 FunFam transcription factor bHLH30 143 206 - -
Sebi284g00059 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 204 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00059 Sebi-Chr284 1108818 1111099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00059 11 333 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.966 1.68e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi284g00059 HLH 2.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00059 - - cave:132184452 406.371