Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00052 ATGCCCCCTGAGCAAGAAACCACTATTGCACCAAACATTCCACCCATCACAAACCGACCCGAAAACACCTCCATCCACGCCGATCCAGAGGCTTCTATCACCAACAAAGTCAAACCCAGTTTCGATGACAACGGCATTCCTCCACAGCCGCAACCAACAACACCAACACCATCCTTTTCCATTCTGCACCAATCCCTCCGTCCCGTTACCCTCAAATTTGAAGATGTTTCGTACAGTATAACCTTCCCAAGCCAAAAGAACAAGAGTTGTGTATTGGCAAAAGAAGCAAAGGTAACGAGAAAAGTACTAACCGGTGTCACCGGCGTAGCGAATTCCGGCGAGTTGACGGCAATGCTAGGTCCTTCAGGGAGTGGCAAGACCACGCTTCTCACCGCTCTTGCCGGAAGGCTTGCCGGAAAAGTCTCCGGCAGCATATCATACAACGGCAACTCAGACCCCGCGTGCATGAAGCGGAAGATAGGGTTCGTGTCTCAAGACGACGTCGTTTACCCTCACCTCACAGTTCTCGAAACGCTCACGTACGCTGCTTTATTGAGGCTGCCAAAGACTCTGAGCAAGGAAGAGAAAGTGGAGCATGCAGAGAGGGTGATTGCGGAGCTTGGACTCACACGGTGTCGTAATAGCCCCGTCGGCGGTTGCATGGGGCTTTTCCGTGGAATCTCCGGTGGGGAAAGAAAACGGGTGAGTATCGGGCAGGAGATGTTGGTGAACCCGAGTTTGTTGTTATTGGATGAACCGACGTCCGGTCTGGACTCAACCACGGCTCAGCTTATTGTTTCGGTTCTTCGTGGACTCGCCCGGGCCGGTCGAACCGTTGTGACCACCATTCATCAACCGTCGAGCCGGTTGTACAGGATGTTCGATAAAGTGGTTGTGCTTTCTGACGGTTACCCGATTTATAGTGGTCATGCGGATCGGGTCATGGATTATCTTGAATCCGTTGGATATGTGCCAGCTTTCAATTTTGTCAACCCGGCAGATTTTCTACTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCAGACAGACCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCTTATAAGAAAAACTTATATCCAGCTCTTAAAGAAGAGATTCAACGAAATAACAGTGAATCAGTGGCTTTTACATCAGGAACACCTAGACGTTCTGATAACCGATGGGCCACTAGCTGGTGGGAGCAATTCAGGGTGCTGCTTAAGAGGGGTTTACAGGAGAGAAGGCATGAATCCTTTTCTGGCTTAAGGATATTCCAAGTCTTGTCTGTATCCATTCTCTCAGGACTTTTGTGGTGGCACTCTGATCCCTCACACATACAAGATCAGGTAGGACTCCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTTAATGCCATCTTTGCATTTCCTCTGGAGAGGCCAATGCTAATAAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTTGCTCGGATGGTGGGGGACTTACCAATGGAGCTTGTGCTTCCTACCATTTTTGTAACTATCACTTATTGGATGGGTGGTCTCAAGCCTTCCCTGGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTTAATGTTCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGTGCCATTCTCATGGATGTGAAGCAGGCCACAACTCTAGCTTCAGTGACCATGCTGGTGTTTCTGTTAGCTGGTGGTTACTACATTCAGCAAATGCCCTCTTTTATAGCTTGGTTAAAGTACATTTCTTTCAGTCACTACTGCTATAAGCTGCTGGTAGGAGTCCAGTATTCAGTAAACGAGGTCTATGAGTGTGGACCAGGATTGCATTGTAGGGTAAGAGATTTTCCAGCCATAAAGTGTCTAGGGCTTGATAATATGTGGGGAGATGTTGCTGCTTTGACTGTAATGTTGATTGGATACAGAATTGTGGCATATCTAGCTTTGAGGATGGGGCAGCCTCACTGA 2025 0.476 MPPEQETTIAPNIPPITNRPENTSIHADPEASITNKVKPSFDDNGIPPQPQPTTPTPSFSILHQSLRPVTLKFEDVSYSITFPSQKNKSCVLAKEAKVTRKVLTGVTGVANSGELTAMLGPSGSGKTTLLTALAGRLAGKVSGSISYNGNSDPACMKRKIGFVSQDDVVYPHLTVLETLTYAALLRLPKTLSKEEKVEHAERVIAELGLTRCRNSPVGGCMGLFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRGLARAGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGHADRVMDYLESVGYVPAFNFVNPADFLLDLANGIVADVKHDDQTDHHEDQASVKQSLISSYKKNLYPALKEEIQRNNSESVAFTSGTPRRSDNRWATSWWEQFRVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGPGLHCRVRDFPAIKCLGLDNMWGDVAALTVMLIGYRIVAYLALRMGQPH 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00052 674 FunFam ABC transporter G family member 22 90 321 - -
Sebi284g00052 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 320 IPR027417 -
Sebi284g00052 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 327 IPR003439 GO:0005524
Sebi284g00052 674 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524|GO:0016887
Sebi284g00052 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 49 665 - -
Sebi284g00052 674 Pfam ABC-2 type transporter 284 349 IPR043926 GO:0140359
Sebi284g00052 674 MobiDBLite consensus disorder prediction 1 58 - -
Sebi284g00052 674 Gene3D - 63 323 IPR027417 -
Sebi284g00052 674 Pfam ABC-2 type transporter 410 616 IPR013525 GO:0016020|GO:0140359
Sebi284g00052 674 Pfam ABC transporter 106 255 IPR003439 GO:0005524
Sebi284g00052 674 CDD ABCG_EPDR 68 309 - -
Sebi284g00052 674 MobiDBLite consensus disorder prediction 10 30 - -
Sebi284g00052 674 SMART AAA_5 112 305 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00052 Sebi-Chr284 928396 932431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00052 101 303 Calmodulin-binding Proteins AT2G36910 30.986 4.30e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00052 K05681 - gmx:100792991 1162.13