Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00046 ATGACTGAAGAATGTGGTGGAAACACAATTGCAACCTCTACTACTACCCCATTAAACTGGTGGTATCTCCAGGCAAATTCTCTTCCTTCCTGGAATGATACTAAACACACATGGAACAACCAAATAAACCCAAACTCTTCCTCTTCTTGTGAAGAGGATATATCATCTTTCACTAATGCTTCCAACCATTCAAGCCTCACCGTTGAATCCTCTCGTAGACTCGTTGATCCACCTGCTCCTTCCTCCAACGAGTTGATGGGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCAAATGGGGAGTTGCACAACAACCATCAAGAAATTGGAGAGAATTTTCTGGATGCACTGTCCTCTAAAAGCATGGCAAGTGGTATGTATGAACCAGCATGTGACTACTTGAAGAAACTTGATACAAGTTGGGAATATAGTGCAGGTTCAACTTCATTCAATAGTTTTGAGAAGCACTTAAATGGGTTTAGTGAGGCCCTAATTGAGAATAATGAAAGGTTGACTAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCTGACCCAGAAGTCAGTAGTAGCCACTTTGATTCACAAACAAACAACAACATGTCTTTGAATTCTTCCATGGATCATCACTACCCACAATCTGACCCTTTTGGAGGAGCAAGTAATAATAAAAATTCCGGAGGAGCAGTCTTACCTAGCTATGATCATCATCATGAGGATCACATGAAGGTGAAGCAAGAATATCATCATGCAAATGAAGTAATAGCAAATAATGGATATCAAAATGGATTCAATAATAGCCTTTCAATTGGAGATAGTGGCAAATTTTACCATGGTGGTGGGTTGCCTAATCTTTCACCATGCACAAGAAATTTCTCAGATGTTATATCATTTAACAGCCGGTTAGGAATTAGGCCACTTCTTGGAGGAATCCATGCACAGAGGCCTAATAATTTGAAATACTTAAACCAATCTGAATCAAAGAAACAAGCTGGCTTTCAAACACCATCACCACCGACAAGAACTATTAATGGAAGAGGAGAGGGAATTACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCATCAGAAACAATCTTGAAGAAGCCTAAGCAAGACACATCAACAACTTCTTCTTCAAAGGTACAGGCACCCAAAGTCAAGCTAGGAGACAAGATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACAGATACAGCATCTGTGCTGTTTGAAGCAATAGGATACATAAAGTTTCTCCAAGAACAAGTCCAGCTATTGAGCAACCCTTACTTGAAGACTAATCCACACAAGGATCCAAGGGGAAGTTTGGATAGAAAAGATAAAGAGGAGGGAAAGCTAGACCTTAGGAGCAGAGGTCTTTGTTTAGTTCCAACTTCATGTACACCTCTTGTTTATAGAGAAAACACTGGACCAGATTACTGGACACCAGCCTATAGAGGATGTTTGTATAGGTGA 1515 0.4013 MTEECGGNTIATSTTTPLNWWYLQANSLPSWNDTKHTWNNQINPNSSSSCEEDISSFTNASNHSSLTVESSRRLVDPPAPSSNELMGEHASDNQLWSHVLSGVGSNGELHNNHQEIGENFLDALSSKSMASGMYEPACDYLKKLDTSWEYSAGSTSFNSFEKHLNGFSEALIENNERLTKLSNLVSTWSIAPPDPEVSSSHFDSQTNNNMSLNSSMDHHYPQSDPFGGASNNKNSGGAVLPSYDHHHEDHMKVKQEYHHANEVIANNGYQNGFNNSLSIGDSGKFYHGGGLPNLSPCTRNFSDVISFNSRLGIRPLLGGIHAQRPNNLKYLNQSESKKQAGFQTPSPPTRTINGRGEGITTREVKKKRSEESSETILKKPKQDTSTTSSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKTNPHKDPRGSLDRKDKEEGKLDLRSRGLCLVPTSCTPLVYRENTGPDYWTPAYRGCLYR 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00046 504 CDD bHLH_AtbHLH_like 398 440 IPR045239 -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 443 464 - -
Sebi284g00046 504 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 383 432 IPR011598 GO:0046983
Sebi284g00046 504 MobiDBLite consensus disorder prediction 359 378 - -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 335 356 - -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 379 394 - -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 335 395 - -
Sebi284g00046 504 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 398 448 IPR036638 GO:0046983
Sebi284g00046 504 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 147 482 - -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 68 87 - -
Sebi284g00046 504 MobiDBLite consensus disorder prediction 450 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00046 Sebi-Chr284 816202 819358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00046 31 504 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.267 5.61e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00046 - - gmx:100527800 736.102