Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00025 ATGTGCAAGGTGCTTCCTGTTGCTGTTTATGTATTTTTTAAGGATCCTGATGGCGTTGATGCCTTCTACATGTTCTCTTCCATTGCTCACTTGTCAAACACTTATGCTAAGCTTTCTTCTCCCTCTAGAGACAATTCTGAGAGTGTCGGTATCATCGAGTACCACAGACCAGGAAGTGTAAAGCAGACTAAGTTATTGACAGTTGTGCGTGTCTATGAAGGCGTGCAATGGCAGATGGCAAAGGCAAGGGACAGAACCGAGGATTTCAAAGATGCTGTGCGCCAGAGTGCTCGCTCTTTGGGTTACGATGAGGCTAAATTGGCGTCCATTTTGGCATCTTTCATTATTCATAAACCTCCTCAAAGATCTCCATTTTCCAAAGCTGCATTGAAGACGCTTGAGAGTATTGGTGAATTGGAACAGTTTTTGTTAAAGCATAGAAAGGACTATACAGATCTACACCGCACAACTGAACAGGAGAGAGATAGCATTGAGCATGAAGTTAGTTCTTTTATTAAAACTTGCCAGGAACAAATTGACGTTCTTAAGAATAGTATAAATCATGAAGAGGAAAATTCGAAAGGTTGGCTTGGCATTGCAACTGCAAAGTCTAATGCTGACACCATTGCCCATAAACATGGGGTGGTTTTAATTTTAAGTGAGAGACTCCATTCGGTTACAGCAAAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAGAGCAATACCACGAAGAAAACTTAATCGTGTGACCAGGAAGGATTCTACTGAAACCTCTAAATCAGCAGATGACGTGGAGCTCAGAGAACCTGATGAGATACGAAGTGAGCCTCTAAGACTCCAACAGCAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAATCTTCTAGATACAGTCCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCATGTCTACACATGTTTTGCAACAAGCTCAGCAAATTGAGCTTCTGTATGAGCAGGCCGTTGAAGCTACTAAGAATGTTGAGCTTGGTAACAAAGAACTCTCACAAGCCATTCAGCGTAATAGCAGCAGCAGGACATTTCTTTTGCTGTTTCTGTTTGTGCTTACTTTTTCCATCCTCTTTCTTGATTGGTATAGTTAA 1167 0.4165 MCKVLPVAVYVFFKDPDGVDAFYMFSSIAHLSNTYAKLSSPSRDNSESVGIIEYHRPGSVKQTKLLTVVRVYEGVQWQMAKARDRTEDFKDAVRQSARSLGYDEAKLASILASFIIHKPPQRSPFSKAALKTLESIGELEQFLLKHRKDYTDLHRTTEQERDSIEHEVSSFIKTCQEQIDVLKNSINHEEENSKGWLGIATAKSNADTIAHKHGVVLILSERLHSVTAKFDQLRAVRFQDAINRAIPRRKLNRVTRKDSTETSKSADDVELREPDEIRSEPLRLQQQLLDDETRALQVELTNLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00025 388 Gene3D - 291 385 - -
Sebi284g00025 388 MobiDBLite consensus disorder prediction 253 276 - -
Sebi284g00025 388 FunFam Syntaxin-81 like 291 385 - -
Sebi284g00025 388 Coils Coil 172 192 - -
Sebi284g00025 388 SUPERFAMILY t-snare proteins 134 352 IPR010989 GO:0016020|GO:0016192
Sebi284g00025 388 Pfam SNARE-complex protein Syntaxin-18 N-terminus 84 164 IPR019529 -
Sebi284g00025 388 PANTHER SYNTAXIN-18 79 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00025 Sebi-Chr284 472545 477819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00025 143 388 SNARE and Associated Proteins AT1G51740 76.113 4.87e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00025 K08492 - gmx:100778011 539.65