Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00018 ATGAACTCAAAGCATTTCTTAGTGCTTCTTTGGTTGCTCATTGTGGTTTTGAAGTGCCATTGCCAAGAGATTAATGACTATGACCAAATTGATAACCCTGCTGTTCTTCCCCTTATCACTCAGCTTGTTTATAGTCGAATTTCCAATTTGACTTCAGTCCTCAATCAAGAAATAACCAGAGACTCCACTTTCTGTGTCAAAGATCCGGATTCTGATTGGAATCAAGCATTTAATTTTTCATCTGATTTGAGCTTCTTGACTTCTTGCATTAAGAAGACTAAAGGAGATATTACCAAACGCTTGTGTACAGCAGCAGAAGTGAAGTTTTACTTAAATAATTTATTGGAGAAATCTACAAGTGCCAATTATTTAAAGCCTAACAAGAACTGCAATTTAACCTCGTGGGTCTCTGGTTGCGAGCCGGGATGGGCCTGTAGTGTTCACTCAAGCCAGAAGATTGACCTTAAAAATTCAAAAGAGATACCAGCAAGAACTTCAAACTGTCAAGCATGTTGTGAGGGCTTCTTTTGTCCTCATGGTATCACATGCATGATACCATGCCCTCTAGGTTCCTATTGCCCTCTTGCTACACTCAATAAAACAACTGGCATATGTGAACCATATCTTTATCAATTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAATATTTGGGCAGACATAAGTAGCAGTGGTGAAATGTTTTGCTCAGCAGGATCATATTGTCCAACAACGACGAAAAGAATTCCTTGTAGTAGTGGGCATTATTGCAGGATGGGTTCCACATCTGAGAAAAGATGCTTCAAGTTGAGTTCCTGTAATTCAAACACAGCAACCCAAAATATGCACGCATATGGAATTATGCTCATTGCTGCCTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAATCGCCAAATCTAGAGAAGCAGCAGCTAGAAGTGCAAAGAAGACTGCAAATGCACACCAAAGATGGAAATTTGCAAAAGATGCTGCTAAGAAGGGTGCAACTGGGCTGCAAGCTCAACTATCACGCAAACTCTCTCGTAAGAAGGAAACAGCACATCTGGGAAAAGTTAAAATTTTGAATCAAGAAACTTCAGAAACAGATGTTGAATTGTTGTCACATTCACAACCTGTCACTTCAAGCATGGTTGCAAGTTCATCTGTGGTGCCGAAGGAAAGTGGAAAAAAACCAAGTGGCCTAATGCATATAATGCATGAAATTGAAAATGATCCATATATTAATGACAACCCTACTATAGAAATAGAAACTAGAGATAAAAGTGTTACAGGAAATGTGTCAAAGGGAAAACAGCCACATACTCATACCCAAATTTTTAAGTACGCATATACTCAACTTGAAAAAGAGAAAGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTCATTAAAATGGCTACAAACACTGAAAAAAGAAAAAGGCCTTTTATTGAGATTTCTTTCAAAGATCTGACTCTTACATTGAAAGCTCAAAACAAACATATATTGAGAAATGTTACTGGGAAAATTAAACCTGGCCGCATTACTGCTGTCATGGGTCCATCAGGAGCTGGCAAGACAACATTGCTTTCAGCTCTAGCTGGAAAGGCATTTGGATGCTTGGTTACTGGTTCAATTCTTATAAATGAAAGGAATGAATCAATTCACTCCTTTAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACCTGACAGTGGAAGAGAATCTCTGGTTCAGTGCACAATGCCGGCTATCAGCTGACTTGTCAAAACCAGAAAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCCTTGGTTGGAACTGTGGAAAAGCGAGGGGTCTCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCACTTTTGATCTTGGATGAACCCACCTCTGGCTTGGACAGTGCATCATCTCAGCTACTCCTAAGAGCACTAAGACGTGAAGCTCTTGAGGGAGTGAATATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTCAAGATGTTTGATGACTTGATACTTCTGGGTAAAGGTGGTCTTACTGTCTATCATGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGCCTGGGGATCAATGTTCCAGAGCGGATTAATCCTCCAGATTACTTTATTGACATTTTGGAGGGTATAGCAGTACCTGGTGGAAGCTCAGGACTCAGTTATAAAGAACTGCCAATTAGATGGATGCTTCATAATGGATATCCAATACCTCTTGATATGAGGCAGAATGCAGAACAATTTCATATGTCCCAAAGTGTAAATTCAGCTAATGAAATAGATCATGATGGATCTGGTAATGTGGAAAAAACCTTTGCTGGAGAATTATGGCAAGATGTGAGAAACAATGTGGAACTGCAAGGGGAGAAGATAAGGTTCAATTTTTTGAAATCCAAGGATTTGTCTGACCGGAAAACTCCTGGTGTATTCAAGCAATATAAGTACTTTCTTATACGGGCTGGGAAGCAGCGATTACGGGAAGCTAGGATCCAAGCCATAGATTATCTTATTTTGTTACTTGCTGGAGCCTGCTTGGGATCACTTACCAAAGCAAGTGATCAAACGTTTGGTGCAGCTGGATACACCTATACGGTGATTGCTGTATCTCTTCTGTGCAAAGTAGCGGCCTTGAGATCATTTTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTTTCCAAAGACACAATTGATCATTTTAATACAGTTATCAAGCCTGTGGTGTACCTCTCTATGTTCTATTTCTTCACCAATCCAAGATCTACTTTTGGAGATAATTATGTTGTGCTGCTTTGTCTTGTGTACTGTGTGACTGGCATAGCATATGCACTGTCCATACTTTTTGAACCTGGTGCAGCCCAGCTGTGGTCAGTACTCCTTCCTGTTGTTTTGACTCTTATTGCAACACAACCAAAAGATAATAAAATTTTGAAGGATATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTTATTATTGCAAATGCTGAAAGGTATCAGGGAGTGTGGCTCATAAGTCGTTGTGGTTCACTTTTGAAAAGTGGCTATGATATTCATGATTGGAGTCTGTGCATATCCATCCTCATCCTTATGGGTGTAATTGCCCGGGCAATAGCATTTTTCTGTATGGTCACCTTCCAAAAGAAGTAA 3330 0.4 MNSKHFLVLLWLLIVVLKCHCQEINDYDQIDNPAVLPLITQLVYSRISNLTSVLNQEITRDSTFCVKDPDSDWNQAFNFSSDLSFLTSCIKKTKGDITKRLCTAAEVKFYLNNLLEKSTSANYLKPNKNCNLTSWVSGCEPGWACSVHSSQKIDLKNSKEIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGICEPYLYQLPPMQPNHTCGGANIWADISSSGEMFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTRERRIAKSREAAARSAKKTANAHQRWKFAKDAAKKGATGLQAQLSRKLSRKKETAHLGKVKILNQETSETDVELLSHSQPVTSSMVASSSVVPKESGKKPSGLMHIMHEIENDPYINDNPTIEIETRDKSVTGNVSKGKQPHTHTQIFKYAYTQLEKEKAQQQENKNLTFSGVIKMATNTEKRKRPFIEISFKDLTLTLKAQNKHILRNVTGKIKPGRITAVMGPSGAGKTTLLSALAGKAFGCLVTGSILINERNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSLVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLGKGGLTVYHGSAKKVEEYFSGLGINVPERINPPDYFIDILEGIAVPGGSSGLSYKELPIRWMLHNGYPIPLDMRQNAEQFHMSQSVNSANEIDHDGSGNVEKTFAGELWQDVRNNVELQGEKIRFNFLKSKDLSDRKTPGVFKQYKYFLIRAGKQRLREARIQAIDYLILLLAGACLGSLTKASDQTFGAAGYTYTVIAVSLLCKVAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFGDNYVVLLCLVYCVTGIAYALSILFEPGAAQLWSVLLPVVLTLIATQPKDNKILKDIANLCYSKWALQAFIIANAERYQGVWLISRCGSLLKSGYDIHDWSLCISILILMGVIARAIAFFCMVTFQKK 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00018 1109 Gene3D - 500 737 IPR027417 -
Sebi284g00018 1109 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 743 IPR003439 GO:0005524
Sebi284g00018 1109 Pfam ABC transporter 519 671 IPR003439 GO:0005524
Sebi284g00018 1109 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 240 1096 - -
Sebi284g00018 1109 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524|GO:0016887
Sebi284g00018 1109 SMART AAA_5 528 720 IPR003593 GO:0016887
Sebi284g00018 1109 Pfam ABC-2 type transporter 700 1109 IPR043926 GO:0140359
Sebi284g00018 1109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 735 IPR027417 -
Sebi284g00018 1109 FunFam ABC transporter G family member 24 496 738 - -
Sebi284g00018 1109 CDD ABCG_EPDR 500 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00018 Sebi-Chr284 314518 323040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi284g00018 518 721 Calmodulin-binding Proteins AT2G36910 26.009 4.66e-11 65.5