Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi284g00001 ATGCGGCAAAGGCGTGAAACTGCTTCAGCAGCATCTAAAGGGTCAAGTAGTGGTGATGCAAGTGAAAAGTCTACTAATGGTGCTGAAATCCACACCACTGTTCATGTTGGAAACTCAAGGAGGTCTTCATTTGTGTGGCTGGCCTTGTTCCTTATAATCACTTATTGCTGTTCAGCCATTTATAATTACCAGTTTCAGAGCATGCCCTTGCCTCTTACTGCAGAACAAGCTGGCAAGAGGGGTTTCTCGGAGATTGAAGCATTCAACCATGTCAAGGCCTTGACTGAGGTGGGCCCTCATCCTGTTGGTTCTGAAGCTCTGCATCAAGCACTCCAGTATGTTCTGACAGCATGTCAAACTATTAAGAAAACAGCTCACTGGGAGGTGGATGTTGAAGTGGATCTTTTTCATGCAAAGTCTGGTGCAAATCGTCTGGTCAGTGGTTTATTTTCGGGGAGAACACTTGTTTATTCAGATCTGAGTCATGTCGTAGTAAGAATCTTGCCAAAATATATATCTGAAGCAAGAGAGAAATCTATTCTGGTCTCTTCTCATATTGATACTGTTTTTTCAACAGAAGGGGCTGGAGATTGCAGTTCATGTGTAGGTGTTATGCTGGAACTTGCTCGTGGAATTTCTCAGTGGGCTCATGGTTTGAAGAAAGCTGTTATATTCTTATTTAATACTGGTGAGGAGGAGGGTCTTAATGGCGCTCATAGCTTCATAACGCAGCATCCTTGGAGTAAAACTGTTCGTATGGCTGTTGATCTAGAGGCCATGGGAATTGGAGGGAAGTCTAGTATTTTTCAGGCTGGTCCCCATCCATGGGCAATTGAGAACTTTGCTTCAGCGGCAAAATACCCATCTGGTCAAATTATCGCACAGGATCTTTTTTCTTCGGGGGCCATAAAATCTGCTACAGATTTTCAAGTGTACAAAGAGGTTGCTGGCCTTTCTGGGCTTGATTTTGCGTACCTAGATAACACTGCTGTATATCATACCAAGAATGACAAATTAGAGCTTTTGAAGAAAGGATCTCTTCAACATCTGGGGGAAAATATGCTTGCTTTCCTGCTTCATATTGGTGCATCTGCTCATTTTCCAGAACGCAATTCAACAGAAACAGAGGAAGATATGAGCAATAACAATGCCATATATTTTGACATTTTGGGAACATATATGGTTGTATACCGTCAAAAGTTTGCTAATATGCTCCATAATTCGGTGATAATGCAGTCACTTCTAATATGGACTACATCATTGGTTATGGGTGGTATACCGGCTGCAGCTTCATTGGCCTTGTCATGTTTGGGTGTTCTCCTCATGTGGGTTTTTGCCTTGAGTTTCTCCCTCCTTGTTGGCTTTCTTCTACCTTCAATATCTTCATCACCAGTGCCATATGTTTCAAGCCCTTGGTTGGTGGTTGGATTATTTGGCGCACCAGCATTTCTTGGAGCATTGACTGGTCAACATTTGGGTTATCTTCTACTGCAAAAATATCTCATGAATGTACATTCAAAGAGAAGGCAATGGCCCCCCATTATTCTATCTGATCTTGTCAAGCTGGAGGCTGAAAGATGGCTCTATAAAGCTGGATCCTTTCAGTGGCTTATTCTTCTCATTCTGGGAAACTATTTTAAAATTGGGTCTTCTTACTTGGCTCTTTTTTGGTTAGTTTCTCCGGCATTTGCATATGGATTTTTTGAAGCAACACTAGCCCCTGCCAGGTTACCAAAGCCACTCAAACTGGCAACCCTAATTCTAGGGTTAGCCATGCCAATTTTAATTTCTGCTGGCACTTTTATTCGGCTAGCTGCTACAGTCATAGGGGGTATGGTTCGACTTGATAGGAATCCTGGTAGTACTCCTGAATGGCTGGGAAATTTTATGATTGCTGCTTTTATTGCTGCTCTCTTGTCTTTGACCTTGGTGTATCTTCTTTCATATGTCCATCTTTCAGGTGCGAAAAGGGCAATCATCCTAGCTACTCTGGTGCTGTTTAGTCTATCACTTGCAATTGTATTATCAGGTGTTGTTCCACCATTTTCTGAAGACACTGCCAGAGCTGTGAATGTTGTACATGTTGTGGATGCAACAGGAAGGATTGATGAAAGACAGAATCCTGTATCATATGTATCTTTATTTTCAACTACACCTGGAAATTTGAACAAGGAGGTAGAACAGATAAATGAAGGTTTTGTATGTGGCAAAGATAAAGCAGTTGATTTTGTGACTTTCTCAGTCAAATATGGTTGCTGGATCTATAATGACACTATGAGTGGCTGGAGTGAGACTGATATTCCTACAATCCAAGTCAATGGTGATGCTAAAGGAAATGGAAGAATTACACAAGTTTCAATCAACACAAAGGATTCCGTTCGTTGGGTTCTTGCAATCAATACAGAAGAAATAGAAGATTTCAACCTTAAAGATGCAAGGAATTCTGAAGAACTAATATCAGTGGACAAGAAGAGTAGTGTGGATGGTTGGCACACTATTCAGTTTTCTGGAGGAAAGAATGCACCAACATTGTTTGATCTAACTCTTTACTGGAAGTCAGGTTCAACACACAGCACTGATAGTTCTCTTCTGAAACTTAGGACTGATGTGAACAGATTAACACCAATAACTGAACGAGTTCTTGAGAAGCTTCCTCGTTGGTGTTCCTTGTTTGGCAAGTCTACCTCTCCCCATACCTTGGCATTCTTGACAAATCTTCCTGACAGGAACAGGAAAAAAAAATCTAAAGGCATGGATGGAAGATTAGAGGCTTTAACTCTAGTGTCTGATGATGTCAGTGTCAGTGAGCTGAGAGACCAAAGCACCCTCCACGAAATGCGGTCAATTCCTCTAGGAACCTCAGTATCTCCAACTCCTTTAAACTCCTCAAAAATCTCAACTTTCAATATCAATTTTAAGAAACCAAGCACTTTCCCATCTTGGGTTTCATCTCCATCTCATGATTTCTCTTTCCTTTCTCTCTCCAAATCAGGATTATGCAGAGCCAGTCAAATTGTTGATTTGTTCCCAACTGTGTCTCCTGAAATTATTGTCCGGGAGGCCAGGTTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGTTGAGGATGGACAGAATGGTGGCTATGTTAGCAGGATTCTCTATACCAAATGGTTGCAAAAGAACCTGTTTGGTTGCTGTTATTGGTAGCTCACTTGATCAAACTTTCTTATTTGGAAGTGAAGATTTCAAGATTGGTGGTTTTGATGGGAAATTTAGCCTCAACAAGGGATATGTAGCTGGCATATTAACAGTAGATACTGTTGCAGACTTTCTACCTAGAAAGGGGCCACTGAGACAGAGAAGGACTGGAATTGCATACATATCAAATGTGGCAGTGAGAGAAAAATTTAGGCAAAGAGGAATAGCTAAACAATTGGTAGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCCATTGCATTACACTGTGATTTGAGAAACCCTGTGGCTACAAAGTTATATCAAGGCCAAGGTTTCAAATGTATAAAGGTTCCAGAAGGAGCTAAGTGGCCTCAACCAAAGACCTCACCGGATATTAAGTTTAATTTTATGATGAAGCTTCTCAACAAATCAGCTGCTTCTAAATCTAATTAG 3687 0.4142 MRQRRETASAASKGSSSGDASEKSTNGAEIHTTVHVGNSRRSSFVWLALFLIITYCCSAIYNYQFQSMPLPLTAEQAGKRGFSEIEAFNHVKALTEVGPHPVGSEALHQALQYVLTACQTIKKTAHWEVDVEVDLFHAKSGANRLVSGLFSGRTLVYSDLSHVVVRILPKYISEAREKSILVSSHIDTVFSTEGAGDCSSCVGVMLELARGISQWAHGLKKAVIFLFNTGEEEGLNGAHSFITQHPWSKTVRMAVDLEAMGIGGKSSIFQAGPHPWAIENFASAAKYPSGQIIAQDLFSSGAIKSATDFQVYKEVAGLSGLDFAYLDNTAVYHTKNDKLELLKKGSLQHLGENMLAFLLHIGASAHFPERNSTETEEDMSNNNAIYFDILGTYMVVYRQKFANMLHNSVIMQSLLIWTTSLVMGGIPAAASLALSCLGVLLMWVFALSFSLLVGFLLPSISSSPVPYVSSPWLVVGLFGAPAFLGALTGQHLGYLLLQKYLMNVHSKRRQWPPIILSDLVKLEAERWLYKAGSFQWLILLILGNYFKIGSSYLALFWLVSPAFAYGFFEATLAPARLPKPLKLATLILGLAMPILISAGTFIRLAATVIGGMVRLDRNPGSTPEWLGNFMIAAFIAALLSLTLVYLLSYVHLSGAKRAIILATLVLFSLSLAIVLSGVVPPFSEDTARAVNVVHVVDATGRIDERQNPVSYVSLFSTTPGNLNKEVEQINEGFVCGKDKAVDFVTFSVKYGCWIYNDTMSGWSETDIPTIQVNGDAKGNGRITQVSINTKDSVRWVLAINTEEIEDFNLKDARNSEELISVDKKSSVDGWHTIQFSGGKNAPTLFDLTLYWKSGSTHSTDSSLLKLRTDVNRLTPITERVLEKLPRWCSLFGKSTSPHTLAFLTNLPDRNRKKKSKGMDGRLEALTLVSDDVSVSELRDQSTLHEMRSIPLGTSVSPTPLNSSKISTFNINFKKPSTFPSWVSSPSHDFSFLSLSKSGLCRASQIVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRMVAMLAGFSIPNGCKRTCLVAVIGSSLDQTFLFGSEDFKIGGFDGKFSLNKGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRQRGIAKQLVAKAESQARSWGCRAIALHCDLRNPVATKLYQGQGFKCIKVPEGAKWPQPKTSPDIKFNFMMKLLNKSAASKSN 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi284g00001 1228 CDD M28_Fxna_like 79 397 - -
Sebi284g00001 1228 Gene3D - 1013 1194 - -
Sebi284g00001 1228 MobiDBLite consensus disorder prediction 8 26 - -
Sebi284g00001 1228 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1016 1221 IPR000182 GO:0016747
Sebi284g00001 1228 Gene3D Zn peptidases 73 380 - -
Sebi284g00001 1228 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 946 1223 - -
Sebi284g00001 1228 MobiDBLite consensus disorder prediction 1 26 - -
Sebi284g00001 1228 SUPERFAMILY Zn-dependent exopeptidases 69 361 - -
Sebi284g00001 1228 FunFam Endoplasmic reticulum metallopeptidase 1 76 378 - -
Sebi284g00001 1228 FunFam Acyl-CoA N-acyltransferases (NAT) superfamily protein 1016 1217 - -
Sebi284g00001 1228 Pfam Peptidase family M28 174 357 IPR007484 -
Sebi284g00001 1228 Pfam Acetyltransferase (GNAT) family 1107 1190 IPR000182 GO:0016747
Sebi284g00001 1228 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1012 1207 IPR016181 -
Sebi284g00001 1228 CDD NAT_SF 1132 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi284g00001 Sebi-Chr284 33130 50998 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sebi284g00001 Peptidase_M28 9.3e-38 CL0035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi284g00001 - - gmx:100803587 1553.5