Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi283g00036 ATGTCTCCAAACCCGCAAGAGCACGAGCAACCACTCTTAGTGGAAGAAAAGCAACAAGAAACAGCTTACGATTCTTCAGAGAAGATCGTGGTGGTTGGAATCGACGAGGAAGGGAGTAACTGGGGTCAGGTGCCACCATTCTCGTGGAAGAAGCTATGGCTCTTCACAGGCCCTGGCTTTCTTATGAGTATAGCGTTCCTGGATCCAGGGAACCTGGAAGGGGACCTTCAGGCTGGTGCAATTGCAGGGTACTCGTTGTTGTGGCTTCTGATGTGGGCCACGGCCATGGGGCTCTTGATTCAGCTCTTGTCTGCGAGGCTCGGCGTGGCCACTGGGAAGCACTTGGCTGAGCTGTGTAGGGAAGAGTACCCCACGTGGGCCAGGATGGTGCTCTGGGTCATGGCTGAGGTTGCTCTCATTGGTTCCGATATACAAGAGGTTATTGGGAGTGCTATTGCTATCAGGATTCTGAGTAATGGACTTGTGCCCCTTTGGGCTGGGGTTGTCATTACAGCTCTTGATTGTTTTATCTTTCTCTTTCTTGAGAACTATGGTGTGAGGTCATTGGAAGCTTTTTTTGCTGTTCTTATTGGTATAATGGCACTGGCGTTCGCATGGATGTTTGGTGAAGCAAAGCCCAGTGGCAAGGAACTTCTTGTTGGCATTTTGATTCCAAAACTCAGCTCCAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCCTTATAATGCCTCACAATGTGTTCTTGCATTCTGCTCTTGTTCAATCAAGGCAGGTTGATCACAGAAACAAAGGCCGGGTTCAAGAGGCTCTTAACTATTACTCTATAGAGTCCACACTTGCCCTTATAGTCTCCTTTGTCATTAATATATTTGTCACAACTGTGTTTGCTAAAGGGTTTTATGGTTCTGAACTTGCAAGTAGCATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGACGTATGGGGGTGGATTATTTCCAATATTATATATATGGGGTATTGGGTTATTGGCAGCTGGCCAAAGTAGCACCATTACTGGTACTTATGCTGGACAATTTATCATGGGAGGTTTTCTAAATTTAAGGTTAAAAAAATGGATAAGGGCATTAATTACCCGAAGTTTTGCCATAATCCCAACCATGATAGTTGCTCTTATATTTGACACCTCAGAGGCATCACTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTCCAAATCCCCTTTGCACTTATTCCTTTGCTCTGTCTGGTGTCAAAGGAGGAAATAATGGGCACTTTCAGAATTGGCGCTGTCCTCAAGGTAACTATCCCCAGGTCATTCAGTATAAGTACTTGA 1350 0.4563 MSPNPQEHEQPLLVEEKQQETAYDSSEKIVVVGIDEEGSNWGQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYPTWARMVLWVMAEVALIGSDIQEVIGSAIAIRILSNGLVPLWAGVVITALDCFIFLFLENYGVRSLEAFFAVLIGIMALAFAWMFGEAKPSGKELLVGILIPKLSSRTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDHRNKGRVQEALNYYSIESTLALIVSFVINIFVTTVFAKGFYGSELASSIGLVNAGQYLQETYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWIRALITRSFAIIPTMIVALIFDTSEASLDVLNEWLNVLQSVQIPFALIPLLCLVSKEEIMGTFRIGAVLKVTIPRSFSIST 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi283g00036 449 Pfam Natural resistance-associated macrophage protein 73 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 Hamap Divalent metal cation transporter MntH [mntH]. 38 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 NCBIfam Nramp family divalent metal transporter 57 426 - -
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 186 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 404 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 131 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 50 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sebi283g00036 449 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 36 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi283g00036 Sebi-Chr283 1161312 1163564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi283g00036 5 438 Inorganic Solute Cotransporters AT2G23150 79.819 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi283g00036 K21398 - gmx:100812381 783.867