Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi283g00021 ATGACCTTCATCAAAGAAGGGGAAGTTGACGATGATCATGTGTCAATCAACAATAAACAAGATGTAGATGGTGGATCACAGATCATTACCAACTATGAAATTGTGACCCCTGAAGAGGATGATAACTTGGGAGAATGGTTGAGTTTAGGCCTCAAAGGAGACATGCCTCTGGAAGCAGCAGATCAAAACCAAGATAACAATTATTCCCAATCAAAACCTCTCCATAACAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCTTGGGTGGTCATCAGAATGCACACAAAAGGGAAAGAGAAGCAGCTAGAAGTTACCAATCTCATAGAATGATGACTGCATCAATGGGACTTGCTTACTCTTCTTTGGCAACAAGATCACTGGGAATCCAGCCACACTCACTTGTGCACAAGCCAAGCAGAGACAAGTCTGCTATGGTGGCTAGATTCAATAATAATGATGCAAATTCTGGGATTAGAATGGCATGGACACCCTTTATGCTTGAACAAGCTATGGATTTCATTTGGCCAGGAAGCTTTCGAATGGAGTTGTCAAAGCAAGAATCAGATATAAATAACTTGACTTAG 603 0.4096 MTFIKEGEVDDDHVSINNKQDVDGGSQIITNYEIVTPEEDDNLGEWLSLGLKGDMPLEAADQNQDNNYSQSKPLHNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSHRMMTASMGLAYSSLATRSLGIQPHSLVHKPSRDKSAMVARFNNNDANSGIRMAWTPFMLEQAMDFIWPGSFRMELSKQESDINNLT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi283g00021 200 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Sebi283g00021 200 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Sebi283g00021 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Sebi283g00021 200 PANTHER ZINC FINGER PROTEIN 4-LIKE 19 197 - -
Sebi283g00021 200 Gene3D Classic Zinc Finger 60 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi283g00021 Sebi-Chr283 576615 577217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi283g00021 25 196 C2H2 Transcription Factor Family AT1G24625 35.227 4.59e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi283g00021 - - ccaj:109809498 273.478