Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi283g00012 ATGGCAACCCTTCAGCTCTACAGAATTCTACACTCTCTGTTTTCACTTGCTTTTCTTCTTCAATTATCATCACTTCCTTCACTTGGGTACAACTTCCCATACAAGTATTTCATCAATTGTGGTTCAGACAGTGATGTAACCGAAAGTGGCCACGGTTACATTGGAGAATCAAACCCTGCTTATCCTAAAACCAGTTTTAACAGCAGCAATACAGAAAGCAATCACTCATCAGTGCCTTCACTTCTCTACCAAACAGCGAGGATTTTTCGAAGTCAATCTTGGTATGAGTTCAATACCGACATAACAAATAGCACCTACCTGGTACGCCTCCATTTCTTTGCTTTCTCTTCCGCAACTAACCTTTCCACTGCTAGTTTCAACGTTTCTATTCCTGGGTTCATGTTGTTGCCAAATTTCGATGCTAGAAATACTACCAATTCTGCTTTAGTAAAAGAGTTTTTCATTAATGCCACTCGCCACAGTTTAAAAATCACTTTCACACCTCTGGCCTCATCATTCGCATTTGTTAACGCCATAGAATTGTTCATACTCCCCCTCCATTTTATCTCTGATCGAGTCTTCCGTTACACGTATGACACTCTCATTTCAGAGTTATCTACTTACGACAGCGTTTTGTTCTCTCGTGTGTTGGAGACCAAACATAGGGTTAATGTTGGTGGCCAAATTGTCACAAGGGGAAATGATAGCTTATTGAGAAATTGGTTTCCTGATGATAGTTATCTCATTAATCCTTGGAATGCGAAGAATAGTTCATCGTATAACCGTCAAATTAAGTACTATGCAGATGATGACTCTTATGGTCCAAACTCAAGTGAGTATATTGCCCCAAATGTTATCTATCAAACTGCCAAAGAGATAAAATATGGCTCTCTCAGTTTAGACATACGTTGGCATCTTCCTGTGGACAAGAACACAGATCACCTTGTTCGTCTTCAGTTCTGTGACATTTTTAATCAAAAGCGAGGTCTTACAGTTATCCATCTCTTCATTGATGAACACTATGTTATGAATGTAAATGATGACAGTGACGTGGCAAACCAGTTTCCTGCTCCTTATTATTATGATTTTGTGGTTCACTCTGATGACTCTGGCTTCATGAAGATCAGCGTAGCGCCTAATAGATTTGATCCTAGACTAAATGCGTTTTTAAATGGGATAGAAATAATGAAAGTGATTGAATTATCAAATTTTGTTCCCCTGGACCTGGATGAATCTAAGCATAGTCGTGTTCCTGTGGTGCTGGGTTCAGTTCTTGGAGGTTTAGTTCTGGTTTCTGTTGTGATAGTTGGGTTTCTTTGGCTTCTTAAATACAGGAGATTGACCGAGGGAACTAGTCAAGGCTCCTCTCTCTCCAGCATAAATCTTGGGCTGAAAATCTCCTTGATTGATCTTCAACTGGCAACAGGGAATTTTGATGAAAAGCAGATAATTGGCAAGGGTGGTTTTGGCAACGTTTATAAGGGGGTTCTCAAGAATGGTGTGACAGTGGCTGTGAAAAGAGGAGAGCCAGGGTCAAGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCCAAGATTCGTCACAAGCACCTTGTTTCCTTGATTGGGTATTGCGATGAAAGGAATGAGATGATACTGGTTTATGAGTACATGGAGAAAGGACCACTTAGAGACCATTTGTACAATACAAATTTGCCAACCTTGTCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTGCCAGAGGTCTTCATTACCTTCACAAAGGAGTAGCTGGGGGAATCATTCACCGTGATGTGAAATCAACCAACATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGACTTTGGCATTTCAAAGATAGGTTCTCTTGATCATCAACCACATGTCAGCACAGATGTTAAAGGCACTTTTGGGTACCTTGATCCCGAGTATTTTATGTCGCTACAGCTGACAGAAAAATCTGATGTGTATTCATTTGGGGTAGTTCTTCTTGAAGTTTTATGTGCAAGACCAGCCATTGATCCATCGCTTCCAAGAAATCAGGTGAACTTGGCAGAATGGGGAATGCTTTGCAAAAGCAAGGGGATAATTGATAAGATCATTGATCCTTCTATCAAAGGACAAATAGATCAAAACTCACTCAGAAAATTCAGTGATACGGTCGAAAAATGCTTACAAGAAGATGGTTCTGATAGGCCAACAATGGGTAATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGCAAGGTGCAGTACAGAGAGAGCCGCATAAGGATAGTTCTAGCAGTGCTTATGCTTCACTTCAATTGCCCAATGTTCCGCGTCTTCCTTCTTTCTCTGTACTAAGTGAAGTGGATGGCATGTCAATTGTGAGGGGTGATGATTGA 2409 0.4097 MATLQLYRILHSLFSLAFLLQLSSLPSLGYNFPYKYFINCGSDSDVTESGHGYIGESNPAYPKTSFNSSNTESNHSSVPSLLYQTARIFRSQSWYEFNTDITNSTYLVRLHFFAFSSATNLSTASFNVSIPGFMLLPNFDARNTTNSALVKEFFINATRHSLKITFTPLASSFAFVNAIELFILPLHFISDRVFRYTYDTLISELSTYDSVLFSRVLETKHRVNVGGQIVTRGNDSLLRNWFPDDSYLINPWNAKNSSSYNRQIKYYADDDSYGPNSSEYIAPNVIYQTAKEIKYGSLSLDIRWHLPVDKNTDHLVRLQFCDIFNQKRGLTVIHLFIDEHYVMNVNDDSDVANQFPAPYYYDFVVHSDDSGFMKISVAPNRFDPRLNAFLNGIEIMKVIELSNFVPLDLDESKHSRVPVVLGSVLGGLVLVSVVIVGFLWLLKYRRLTEGTSQGSSLSSINLGLKISLIDLQLATGNFDEKQIIGKGGFGNVYKGVLKNGVTVAVKRGEPGSSQGLPEFQTEIMVLSKIRHKHLVSLIGYCDERNEMILVYEYMEKGPLRDHLYNTNLPTLSWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGISKIGSLDHQPHVSTDVKGTFGYLDPEYFMSLQLTEKSDVYSFGVVLLEVLCARPAIDPSLPRNQVNLAEWGMLCKSKGIIDKIIDPSIKGQIDQNSLRKFSDTVEKCLQEDGSDRPTMGNVLWDLEYALQLQQGAVQREPHKDSSSSAYASLQLPNVPRLPSFSVLSEVDGMSIVRGDD 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi283g00012 802 FunFam FERONIA receptor-like kinase 35 185 - -
Sebi283g00012 802 Gene3D - 34 183 - -
Sebi283g00012 802 Gene3D - 217 399 - -
Sebi283g00012 802 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Sebi283g00012 802 FunFam Receptor-like protein kinase FERONIA 554 770 - -
Sebi283g00012 802 SUPERFAMILY Protein kinase-like (PK-like) 455 749 IPR011009 -
Sebi283g00012 802 Gene3D Phosphorylase Kinase; domain 1 443 553 - -
Sebi283g00012 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Sebi283g00012 802 Pfam Protein tyrosine and serine/threonine kinase 481 745 IPR001245 GO:0004672|GO:0006468
Sebi283g00012 802 Gene3D Transferase(Phosphotransferase) domain 1 554 773 - -
Sebi283g00012 802 ProSiteProfiles Protein kinase domain profile. 478 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi283g00012 802 SMART serkin_6 478 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi283g00012 802 PANTHER OS07G0166700 PROTEIN 465 755 IPR045272 GO:0004714|GO:0006468
Sebi283g00012 802 FunFam receptor-like protein kinase FERONIA 444 553 - -
Sebi283g00012 802 Pfam Malectin-like domain 38 398 IPR024788 -
Sebi283g00012 802 CDD STKc_IRAK 484 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi283g00012 Sebi-Chr283 334087 336495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi283g00012 12 788 Receptor kinase-like Gene Family AT2G23200 43.399 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi283g00012 Malectin_like 2.3e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi283g00012 - - gmx:100789555 969.918