LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi283g00011	ATGGCAACTTTTCAGCTCCACAGAATTCAACACTCTATGTTCTTGCTCGCTTTTCTTCTTCAATTCTCATCACTGCAGTTTCCCTCACTAGGGTACAATTTCCCAGACAGGTATTTCATCAATTGTGGCTCAGATAGTGATGTAACCGAAAGTGGCCACCGTTACGTTGGGGAATCAAACCCTATAGCAAGTTTCAGCAGCAACAGCAATACAGAAAGCAATCAATCAACAGTGCCTTCACCTCTGTACCAAACAGCAAGAATTTTTCGAAGTCAATCTTGGTATGAGTTCAGTACTGATATTAATAGCACCTATCTGGTACGCCTCCATTTCTTTGCTTTCTCTTCGCCAAGTAATCTTTCCACAGCTAAGTTCAACGTTTCTGTTCCTGGCTTCTGGCTTTTGCCAAATTTCGATGTCACAAATACTACTAACTCTGCTTTAGTGAAAGAGTTCTACATGAAAATCACTCGCCGTAGATTCAAAATCACTTTCACACCTCTAGCATCATCATTCGCGTTTGTAAATGCTATAGAACTCTTTGTCCTCCCCCTCCATTTGATGGCCGATTCAGTCGCACGTTTCACTTATGGCAATGATAGGCAGAGTCTACCTTACAACGGCAAATTACTCTCTCGGACATTGGAAACCAAACATAGGATCAACGTTGGTGGCCAAACAGTGACAAGGGGCAACGATAACTTATTGAGAAACTGGTCTCCTGATGATAGTTTTCTCAGTAATCCGAGAAACGCGAAGAATAGTTCCCCGTACAATGGTGAAATTAAGTACAATGTTGGCGATGACTCTGATGGTCCAAATTCAAATCAATATACTGCGCCAAATGCTGTCTACCAAACTGCTAAAGAGATTAATAACATCTCTGCCATTGCTGCTGGAGGCTTCATCGGAGTAAGATCAAACATGAACATAACTTGGCGTCTTCCCGTGGACAAGAATACTGATCATCTTGTTCGGTTTCACTTTTGTGACATTCATAATCAACAGAGTGGTCTTACAATCTTTGTACTGTTCATTTACGACAGTTATGTTATCAATGTTAATGACGATGAGAAACTTGCGAGCCCGCGGCCTAATCCTTATTTTTATGATTTTGTGGTTCACTCTGATGACTCTGGGTTCATGAAGATCAGTATAGCACCTAATGCATCTGTTCCTCAACCAAATGCGTTTTTGAACGGACTAGAAATAATGAAACTGATTGAATCATCAGGTTCTGCTCCCCAGGACCTGAATGACTCTAACTCCAACCATAGTAGTCTTCCCGTGGTGCTAGGTTCAGCTCTTGGAGGTTTAGTTCTGGTTTCTGTTGTGATAGCTGTTGGGTTTCTTTGGCGTCGTAAAATGAGGAAACAAAAGCCAGTTGACGGTTCTGATTGGTTGCCAATTCCCATTACTGCTGGAGGGAGTTCTCACAGCAGATTGACTGAGGGAACCACACAAGGCTCCCCTCTTCCCAACATAAATCTTGGCCTAAAAATCCCCTTGCTTGATCTTCAATCTGCAACCAAGAACTTTGATGCAAAGCAGATAATTGGCAAGGGTGGTTTTGGCAATGTCTATAAGGGAGTTCTCAAGAATGGCGTAAGAGTGGCTGTGAAAAGAGGTGAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCCAAGATTCGTCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGGTATGAAATGATTCTGGTTTATGAGTATATGGAGAAAGGGACACTCAGAGACCATTTGTACAATACAAAATTGCCAACCTTGTCTTGGAAGCAGAGGCTTCAAATTTGTATTGACGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTGAAATCCACCAATATATTGCTTGATGAGAACCTTGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGGACAGGTCCTCTTGATCATCAACCTTATGTTAGCACTGGTGTTAAAGGCACTTTTGGGTACCTTGATCCTGAGTATTTTAGGTCACAACAGCTGACAGAAAAATCTGATGTGTATTCATTTGGGGTAGTTCTTCTTGAAGTTTTATGTGCAAGACCAGCCATTGATCCATTGCTTCCAAGGGATCAGGTGAACTTGGCTGAATGGGGAATGCTTTGCAAAGACAAGGGGATACTTGAAGAGATCATTGATCCTTCCATCAAGGGGCAAATAGAACAAAACTCACTCAGAAAGTTTAGTGACACTGTAGAGAAGTGCTTACAAGAAGATGGTTCTGATAGGCCAACAATGGGTGATGTGTTGTGGGACTTGGAGTATGTGTTGCAGCTTCAGCGAGGTGCAATACACAGAGAGCCACATGAGGATAGTTCTAGCAGTGTTTCTGCATCAATTCAATTGCCCAATGTCCGGCGTCTTCCTTCACTCTCTACACTAAGTGAACTCGATGACTTATCGATTGCAAGGATTGATGAATCTGATATTGCAGCAGATTCCGTTTTCTCTCAGTTGAAAATTGATGATGCTAGATAG	2568	0.4248	MATFQLHRIQHSMFLLAFLLQFSSLQFPSLGYNFPDRYFINCGSDSDVTESGHRYVGESNPIASFSSNSNTESNQSTVPSPLYQTARIFRSQSWYEFSTDINSTYLVRLHFFAFSSPSNLSTAKFNVSVPGFWLLPNFDVTNTTNSALVKEFYMKITRRRFKITFTPLASSFAFVNAIELFVLPLHLMADSVARFTYGNDRQSLPYNGKLLSRTLETKHRINVGGQTVTRGNDNLLRNWSPDDSFLSNPRNAKNSSPYNGEIKYNVGDDSDGPNSNQYTAPNAVYQTAKEINNISAIAAGGFIGVRSNMNITWRLPVDKNTDHLVRFHFCDIHNQQSGLTIFVLFIYDSYVINVNDDEKLASPRPNPYFYDFVVHSDDSGFMKISIAPNASVPQPNAFLNGLEIMKLIESSGSAPQDLNDSNSNHSSLPVVLGSALGGLVLVSVVIAVGFLWRRKMRKQKPVDGSDWLPIPITAGGSSHSRLTEGTTQGSPLPNINLGLKIPLLDLQSATKNFDAKQIIGKGGFGNVYKGVLKNGVRVAVKRGEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTKLPTLSWKQRLQICIDAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIDPLLPRDQVNLAEWGMLCKDKGILEEIIDPSIKGQIEQNSLRKFSDTVEKCLQEDGSDRPTMGDVLWDLEYVLQLQRGAIHREPHEDSSSSVSASIQLPNVRRLPSLSTLSELDDLSIARIDESDIAADSVFSQLKIDDAR	855

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi283g00011	855	Gene3D	Transferase(Phosphotransferase) domain 1	589	808	-	-
	Sebi283g00011	855	Pfam	Protein tyrosine and serine/threonine kinase	516	780	IPR001245	GO:0004672\|GO:0006468
	Sebi283g00011	855	FunFam	Putative receptor-like protein kinase	37	184	-	-
	Sebi283g00011	855	Pfam	Malectin-like domain	40	406	IPR024788	-
	Sebi283g00011	855	FunFam	Receptor-like protein kinase FERONIA	589	805	-	-
	Sebi283g00011	855	PANTHER	OS07G0166700 PROTEIN	500	790	IPR045272	GO:0004714\|GO:0006468
	Sebi283g00011	855	ProSiteProfiles	Protein kinase domain profile.	513	786	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi283g00011	855	ProSitePatterns	Protein kinases ATP-binding region signature.	519	541	IPR017441	GO:0005524
	Sebi283g00011	855	SMART	serkin_6	513	786	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Sebi283g00011	855	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	633	645	IPR008271	GO:0004672\|GO:0006468
	Sebi283g00011	855	FunFam	Putative receptor-like protein kinase	213	408	-	-
	Sebi283g00011	855	Gene3D	-	214	408	-	-
	Sebi283g00011	855	Gene3D	-	37	182	-	-
	Sebi283g00011	855	SUPERFAMILY	Protein kinase-like (PK-like)	503	814	IPR011009	-
	Sebi283g00011	855	Gene3D	Phosphorylase Kinase; domain 1	479	588	-	-
	Sebi283g00011	855	MobiDBLite	consensus disorder prediction	246	261	-	-
	Sebi283g00011	855	MobiDBLite	consensus disorder prediction	246	276	-	-
	Sebi283g00011	855	CDD	STKc_IRAK	519	784	-	-
	Sebi283g00011	855	FunFam	receptor-like protein kinase FERONIA	478	588	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi283g00011	Sebi-Chr283	272141	274708	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi283g00011	32	855	Receptor kinase-like Gene Family	AT2G23200	46.793	0.0	670

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Sebi283g00011		Malectin_like	7.4e-27	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi283g00011	-		-	gmx:100789555	1110.52