Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi282g00065 ATGGAAACCAAACCCGGCCAAACCATCAAGCTCCTCTGTAGCTACGGCGGCAAGATCCTTCCTCGCGCCACCGATGGTGAGCTCCGTTACGTTGGCGGCCACACCAGAGTACTCGCCGTCGATCGTTCCATATCCTTTTCTGAATTGATGGTGAAACTGGGAGAGTTGTGCGGTTCGTCTGTGATCTTGAGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATCTCCATCACCAGCGACGAAGATTTGGCCAACATAATTGAGGAATATGATCGTGCCTCATCGAAGTTAACTCATCCGTTGAAGATCAAAGCCGTTCTTTCGCCGCCAAAATCAATGAAGAAGGTTTCTCCTGTTCCGTCGTCTTCGTCCAGTGCTAGTCCCTCTCCATCCAGATCGCCTCATACCTCATCCGAATCGCTGCCGTACGCGGCGGTTCATCGCATCAGCCGCTTCAATCGCTCGCCGCGGGCGCCGGTAGGGTATCCGATCGGCTTCCGTAATGGATCGGCGAAAGCTGGTTGCTACCAGGGCCGGTTCGAGGGAAGCCCAAGGTCAAGAAAAGGGGATGGAGACATGGTGCCGTAA 591 0.5431 METKPGQTIKLLCSYGGKILPRATDGELRYVGGHTRVLAVDRSISFSELMVKLGELCGSSVILRCQLPKGDLETLISITSDEDLANIIEEYDRASSKLTHPLKIKAVLSPPKSMKKVSPVPSSSSSASPSPSRSPHTSSESLPYAAVHRISRFNRSPRAPVGYPIGFRNGSAKAGCYQGRFEGSPRSRKGDGDMVP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi282g00065 196 MobiDBLite consensus disorder prediction 116 141 - -
Sebi282g00065 196 MobiDBLite consensus disorder prediction 110 143 - -
Sebi282g00065 196 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Sebi282g00065 196 SUPERFAMILY CAD & PB1 domains 25 114 - -
Sebi282g00065 196 CDD PB1_UP2 12 97 - -
Sebi282g00065 196 PANTHER OS05G0427100 PROTEIN-RELATED 7 154 - -
Sebi282g00065 196 SMART PB1_new 23 111 IPR000270 GO:0005515
Sebi282g00065 196 Gene3D - 29 107 - -
Sebi282g00065 196 MobiDBLite consensus disorder prediction 156 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi282g00065 Sebi-Chr282 1076809 1078085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi282g00065 9 96 MAP Kinase Kinase Kinase AT5G57610 48.864 5.38e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi282g00065 - - lja:Lj0g3v0315899.1 234.572