Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi282g00039 | ATGATAAATGCGTTTCCTTTGCAGAAGAGTGTCGTTAGAGTGCAAGCTGAGAGTGAGGATTATGAATTGAAGCAAATGAGGGACATGGCTGCTGCCAGAAAGAGATGGGAAGCTCTGATCAGGGATGGAAAAGTTAAAGTTCTCACCCCAAGGGAAGCTGGGTATGCAGTTCAGCTTTCAAATAAGCCTCTTCTTGATGTTCGCCCCTCAAATGAGCACAACAAGGCATGGGTGAGAGCTGCAACCTGGATTCCAATATTTGATGTTGATAATGGACTAGATGTTGGAACCATTCCCAGAAAAATCACAAATTTTGTTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCATATGATAGCCAGTTCTTAGCCAAAGTGGAGGAGAAGTTCCCCAAAGACACAGAATTAATTGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCTTGTGAGCTACTGTATAATGCTGGCTATGAAAATTTGTTCTGGGTTCAAGGAGGCTTAGAGGCTGCTGAAGAAGAGGATCTTGTTGTAGAGGGTCCAGTGCCTCTTAAGTTTGCTGGAATTGGTGGTGTTTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCTGCGGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCTTGATTGGAGTCATTCTTGCTGCCGATGCATTATTTATCGGTGCTCAGCAAGTCGGGCGCTATCTTCAGGAGATCAGGACCCATTGA | 750 | 0.4547 | MINAFPLQKSVVRVQAESEDYELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVRAATWIPIFDVDNGLDVGTIPRKITNFVMGGWWSGMPTLSYDSQFLAKVEEKFPKDTELIVACQKGLRSLAACELLYNAGYENLFWVQGGLEAAEEEDLVVEGPVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGVILAADALFIGAQQVGRYLQEIRTH | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi282g00039 | 249 | CDD | RHOD | 64 | 171 | - | - | |
| Sebi282g00039 | 249 | ProSiteProfiles | Rhodanese domain profile. | 58 | 181 | IPR001763 | - | |
| Sebi282g00039 | 249 | Gene3D | - | 45 | 214 | IPR036873 | - | |
| Sebi282g00039 | 249 | PANTHER | RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC | 8 | 247 | IPR044664 | - | |
| Sebi282g00039 | 249 | SMART | rhod_4 | 48 | 178 | IPR001763 | - | |
| Sebi282g00039 | 249 | Pfam | Rhodanese-like domain | 54 | 171 | IPR001763 | - | |
| Sebi282g00039 | 249 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 43 | 180 | IPR036873 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Sebi282g00039 | Sebi-Chr282 | 596709 | 599672 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi282g00039 | 11 | 249 | Sulfurtransferasese or Rhodanese | AT4G24750 | 76.151 | 1.46e-142 | 399 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sebi282g00039 | - | - | gmx:100791331 | 451.44 |