Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi281g00044 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAGAGTAGTGGTCCACCTGCAAACCAATACACTGCACCACCTAGAGGGGGTAGCACATACGGTGGAGGTGGAGGCCCTGATAGAGGAGAGCCAAGGGGCAATGTTGCTAAGAGTGGTGCTCCACAGAAAGTTTTACCAATTGAGATACCCTCTATGCCATTGGATGAGATAAATAGGTTAACAGGAAATTTTGGTTCAAAGGCTTTTATTGGTGAAGGTTCCTATGGGAGGGTTTTCTATGCAAAATTGAGTGATGGAACTGAAGCTGCAATTAAGAAGCTTGATACCAGTTCTTCACAAGAACCTGACACTGATTTTGCTGCTCAGTTATCAGTTGTTTCAAGACTGAAGCATGATCATTTTGTGGAGTTGATTGGATATTGCCTAGAGGCAGACAACAAAATATTGGTTTATCAATATGCAAGTTTGGGTTCATTGCATGACATATTACATGGAAGGAAGGGTGTACAAGGGGCTGAACCAGGTCCAGTTTTAAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGACTAGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATAGTTCATCGTGACGTTAGATCCAGCAATGTCTTACTGTTCAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGATACAGCAGCTCGGTTACATTCAACAAGAGTCTTGGGAACATTTGGCTACCATGCTCCAGAGTTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGACTACCCACCAAAGGCTATTGCTAAGTTAGCAGCTGTTGCAGCACTTTGTGTTCAATATGAAGCTGACTTCAGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCGGCTGGTCCTGACCATAGTGCTTGA 957 0.4368 MLCCGGAEEESSGPPANQYTAPPRGGSTYGGGGGPDRGEPRGNVAKSGAPQKVLPIEIPSMPLDEINRLTGNFGSKAFIGEGSYGRVFYAKLSDGTEAAIKKLDTSSSQEPDTDFAAQLSVVSRLKHDHFVELIGYCLEADNKILVYQYASLGSLHDILHGRKGVQGAEPGPVLSWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDVRSSNVLLFNDYEAKIADFSLTNQSSDTAARLHSTRVLGTFGYHAPELSEDKVKQCVDPKLNNDYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPDHSA 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi281g00044 318 ProSiteProfiles Protein kinase domain profile. 73 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi281g00044 318 Gene3D Transferase(Phosphotransferase) domain 1 256 313 - -
Sebi281g00044 318 Gene3D Transferase(Phosphotransferase) domain 1 151 255 - -
Sebi281g00044 318 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 251 311 - -
Sebi281g00044 318 SMART tyrkin_6 73 303 IPR020635 GO:0004713|GO:0006468
Sebi281g00044 318 Pfam Protein tyrosine and serine/threonine kinase 78 257 IPR001245 GO:0004672|GO:0006468
Sebi281g00044 318 SUPERFAMILY Protein kinase-like (PK-like) 52 302 IPR011009 -
Sebi281g00044 318 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Sebi281g00044 318 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Sebi281g00044 318 FunFam probable protein kinase At2g41970 46 149 - -
Sebi281g00044 318 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Sebi281g00044 318 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi281g00044 Sebi-Chr281 1094350 1096869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi281g00044 64 309 Trihelix Transcription Factor Family AT5G38560 35.000 5.83e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Sebi281g00044 PK_Tyr_Ser-Thr 4.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi281g00044 - - gmx:100812507 554.673