Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi281g00017 ATGGCTGCGGTTCGTGCCAATGAACAAATGGAGGATTTCAGCCATGTTGAGACTGGCCGTAACGCAGTCTTCGCCGGAATTTACGATGGCCATGCCGGTGACGATGCTGCCCGCTATCTCAACAATTTCCTCTTCGAGTATCTAATAGGGTTTATTCAGGAGAGTCGTGATATGTCTGAAGTAGTTCTAAGGGATGCTGTTGTTGCTTCGGAGGTTGGGTTTCTGGAAGTTGTTCGACATGGTTATGTGGCAAAGCCAAATATGGGTAAAGTTGGTTCGTGTTGTCTGGTTTGTTGTATCTGGAGAAATTCACTATATATCGCCAACCTTGGAGATTCCCGTGCTGTTCTTGGTACTCTGGATAGCAGGAACAGGATAACTCCTCTCCAGTTAAACCAAGAGCACAATCTCAGTATAAACGACGTCAGAAATGAACTCAGGCTTGCCAATCCAGATGATCCCGGAATTGTGGTTCACACTCGTGGAGCATGGCGCGTTAAAGGCATCATCGAGGTTACCAGAACTATAGGAGATGCATATTTGAAGCGGCCACCGTTCACTTTAGAACCAAATTTCCCAGACTTCCAGGTGCCTAAACCTTTTGAACGACCAGTGTTATCAGCAGAGCCATTTGTTCACACAAGAGCATTACGAAACCAGGATAAATTCGTTATACTTGCATCAGATGGACTTTGGGATCACATATCAAGTCAGGAAGCAGTTAACATTGTACAAGGAAATCCACGAAATGGGATTGCAAAAAGACTTGTTAAGACTGCTCTAAGGGTGGCAGCTGGTAAAATGGTAAGAAGATATAGAGAGCTTGTTACGATTGAGCCGGGAAAGGACGGCAGGCGCACTATTCATGATGATATCAGTGTCATTGTTATCTTCATAAACCATCAGTTACTTGGGACGGGAAATTATGTCCCAGAGTTGTCCTTCAAAGGCTTCGTTGACAACGCTTTTCCATCAGATTTTAGAAAAGTCCGCGATTTGCTGACATGA 1008 0.4464 MAAVRANEQMEDFSHVETGRNAVFAGIYDGHAGDDAARYLNNFLFEYLIGFIQESRDMSEVVLRDAVVASEVGFLEVVRHGYVAKPNMGKVGSCCLVCCIWRNSLYIANLGDSRAVLGTLDSRNRITPLQLNQEHNLSINDVRNELRLANPDDPGIVVHTRGAWRVKGIIEVTRTIGDAYLKRPPFTLEPNFPDFQVPKPFERPVLSAEPFVHTRALRNQDKFVILASDGLWDHISSQEAVNIVQGNPRNGIAKRLVKTALRVAAGKMVRRYRELVTIEPGKDGRRTIHDDISVIVIFINHQLLGTGNYVPELSFKGFVDNAFPSDFRKVRDLLT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi281g00017 335 ProSitePatterns PPM-type phosphatase domain signature. 24 32 IPR000222 GO:0043169
Sebi281g00017 335 SMART PP2C_4 1 297 IPR001932 -
Sebi281g00017 335 Pfam Protein phosphatase 2C 21 265 IPR001932 -
Sebi281g00017 335 ProSiteProfiles PPM-type phosphatase domain profile. 1 299 IPR001932 -
Sebi281g00017 335 Gene3D - 1 305 IPR036457 -
Sebi281g00017 335 CDD PP2Cc 5 299 IPR001932 -
Sebi281g00017 335 PANTHER PROTEIN PHOSPHATASE 5 297 IPR015655 GO:0004722|GO:0006470
Sebi281g00017 335 SUPERFAMILY PP2C-like 7 300 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi281g00017 Sebi-Chr281 758957 760656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi281g00017 1 327 PP2C-type Phosphatase Gene Family AT5G06750 52.108 1.03e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi281g00017 K01102 - gmx:100778238 363.614