Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi281g00014 ATGGGAATGGACAGAGTGCAAAGTGCCTATGAGCCCTTGGATGAAGCGTTTGAAATTGGGAAAGAATCGTATCGGGGGCAGCAATACAGCCAGATTTACTTCGCTCGCCTTCACTTGATGAGAACACTCTTGTATTCCCTTGTTCCCCATTGGAAACCCAATTTTCCTGTATGCACAGTGTTGGGATTGGAAGAGGGCAAGGAGTGTATCATTGTTGGAACCCTCTATAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCCAAGCAGAAAACGGTGGTTCCACTTGTCAGGCCGCATAACTTTGTGCATGAAGATGATTATCTAGTTTTGGAAGATGAAAGTGGGAGAGTTAAGCTCTGTGGGAGTGATATTTCACCATCTGTGTATGTAACAGGAATAGTGGTTGCTTTACATGGAAAGGAAACAGGGGCAGGTGAATTTTTGGTTCATAATGTTCTAGAAGCTGGGTTACCACCACAGATAGAATTTCCTCTTAAATCAAGGGAAGACAAATATGTTGTTCTTGTGTCAGGATTAAGTGTTGGGAGCAGCAACTCTAATCCACTTCAGTTTCAGCTTCTCATTGATCATATTACTGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCATCGCAAATTGTTCATGTGGTCATAGCTGGAAATTCGGTTGAAATACCTCGTGGACTAGTTAATGGACAGAATTTGGCCTCAAAAGATCTCTCGAGAATCTCAGAACCAATAAAGGAGCTAGATATTCTGTTGAATCAGATTACTGCTGGTTTGCCTTTGGATATCATGCCAGGCCCCAATGATCCTTCTAATTACTCATTGCCACAGCAGCCATTGCATAGATGCCTTTTCCCTGGGTCATCAGCATATAACACCTTTAGATCTTGTTCGAATCCTCATAGTTTTGAGCTTGATAATATCAGGTTTCTTGGGACATCTGGTCAAAATATAGACGATCTTGACAAGTACTCCGAGGCAAAGGATAAACTTGATTTCGTGGAAAGGACATTAAGATGGAGGCATTTGGCACCCACAGCACCCAATACTCTTGGGTGCTATCCTTTTACTGACAGAGATCCTTTCTTTATCGAGAGTTGTCCTCATGTGTACTTTGTTGGCAATCAGGATAAATATGACACTCGTGTGATAAAGGGATCAGATGGACAGTTAGTGAGACTCATAAGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGGTGACAGTTACTGCCTCTGCAGAATGA 1269 0.4208 MGMDRVQSAYEPLDEAFEIGKESYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNFPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKQKTVVPLVRPHNFVHEDDYLVLEDESGRVKLCGSDISPSVYVTGIVVALHGKETGAGEFLVHNVLEAGLPPQIEFPLKSREDKYVVLVSGLSVGSSNSNPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPRGLVNGQNLASKDLSRISEPIKELDILLNQITAGLPLDIMPGPNDPSNYSLPQQPLHRCLFPGSSAYNTFRSCSNPHSFELDNIRFLGTSGQNIDDLDKYSEAKDKLDFVERTLRWRHLAPTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYDTRVIKGSDGQLVRLISVPKFSETGVAVMVTVTASAE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi281g00014 422 Pfam DNA polymerase delta subunit OB-fold domain 28 154 IPR040663 -
Sebi281g00014 422 Gene3D - 167 421 - -
Sebi281g00014 422 FunFam DNA polymerase delta small subunit 160 421 - -
Sebi281g00014 422 FunFam DNA polymerase delta subunit 2 34 158 - -
Sebi281g00014 422 Pfam DNA polymerase alpha/epsilon subunit B 176 385 IPR007185 GO:0003677|GO:0006260
Sebi281g00014 422 CDD MPP_PolD2_C 175 415 IPR041863 -
Sebi281g00014 422 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 6 417 IPR024826 -
Sebi281g00014 422 Gene3D - 35 158 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi281g00014 4 417 Core DNA Replication Machinery Family AT2G42120 78.502 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi281g00014 K02328 - gmx:100780072 745.347