LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi280g00016	ATGTTTACTTGTGCATTTCATCTAAAATTAGTTATCATATTACCCTGGAAGCTAATAGGGGCAAGATACTTCAACAAAGGCTATGCATCTGTTGCTGGCCCACTCAATTCCTCCTTTGACTCACCTAGAGACAATGAAGGCCATGGATCCCACACTCTATCAACAGCTGGTGGTAACATGGTACCTGGAGTCAGTGTCTTTGGCCAGGGCTCTGGAACAGCAAAAGGTGGCTCACCAAGAGCCAGGGTGGCAGCATACAAGGTCTGTTGGCCCCCAATTAGTGGTGATGAGTGCTTTGATGCAGATATACTTGCTGGTTTTGATATGGCCATCCATGATGGAGTTGATGTGTTGTCTGTGTCACTTGGTGGCTCTGCCTCTGCATTTTTCAATGATAGTGTTTCCATTGGATCCTTCCATGCTGCTAAGAAAGGGATTGTGGTTGTTTGCTCTGCTGGCAATAGTGGACCTGCTGATGCTACTGCAGAAAACCTTGCACCATGGTATATCACAGTTGGTGCCAGCACAATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACAAGATAAGCCTGAAGGGTGCAAGTTTATCAGCTGCAAGATTGGCACACAAGTTCTATCCAATTATTAAAGCTACAGGTGCTAAATTGGCAAGTGCAACAACTGAAGATGCTGTGCTGTGCCAAAATGGAACTCTTGATCCCAACAAGGTAAAAGGAAAGATTGTAGTATGCCTCCGAGGGGTAAATGCACGAGTGGACAAAGGAGAGCAAGCTTTGCTAGCTGGTGCTGTGGGAATGGTCCTTGCCAATGATAAGAGTAATGGCAATGAAATTTTAGCTGATCCTCATCTCCTTCCTGCTTCTCATATCAATTTCACTAATGGTGTTGCTGTCTTTGATTACATCAACTCAACCAAGTTCCCTGTGGCTTATATTACACATCCAAAGACAAAATTGCATACTAAGCCAGCCCCCTTCATGGCAGCATTTTCATCCAAAGGACCAAACACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCTGCCTACACTGAAGCTGAAGGGCCAACTAATCAAGAGTTTGACAAGCGCCGGATTCCATATAACTCAGTCTCAGGCACATCAATGTCATGCCCTCACATTTCAGGCATTGTGGGTTTGTTGAAAACCCTATATCCTTCATGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACGGCTACAACACTAGATAATGAGGTGGAGCCACTATTGAATGCTACTGACAGCCAGGCAACACCATTTAGTTATGGGGCAGGACATGTCGAACCAAACAGAGCAATGGATCCTGGCCTTGTCTATGACACAACAATGGATGATTACGTGAACTTGTTGTGTGCTTTAGGTTATAATGAAACACAAATCTCAATGTTTACAGAAGATCCTTATCAATGCCACAAGAATTTTAGTCTCCTCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTCTCCGGGTCAGTAACAGTTACAAGGACATTAAAAAATGTTGGTTCTCCAGCAACATATATTGCTCACGTTCAAAACCCAAATGGGATCAGCATTTCAGTGGAGCCAAACATCTTGAAGTTCAAAAAGGTTGGTGAAGAAAAGAGCTTTAAAGTAACCTTGAAAGTCAAGCAAGGAAAAGCAACAAATAACTGTGTGTTTGGAAAGTTGATATGGTCAGATGGCAAGCATTATGTCAGGAGTCCTATAGTTGTGAAGGCACTCTAG	1788	0.434	MFTCAFHLKLVIILPWKLIGARYFNKGYASVAGPLNSSFDSPRDNEGHGSHTLSTAGGNMVPGVSVFGQGSGTAKGGSPRARVAAYKVCWPPISGDECFDADILAGFDMAIHDGVDVLSVSLGGSASAFFNDSVSIGSFHAAKKGIVVVCSAGNSGPADATAENLAPWYITVGASTMDREFPSYVVLGNKISLKGASLSAARLAHKFYPIIKATGAKLASATTEDAVLCQNGTLDPNKVKGKIVVCLRGVNARVDKGEQALLAGAVGMVLANDKSNGNEILADPHLLPASHINFTNGVAVFDYINSTKFPVAYITHPKTKLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQEFDKRRIPYNSVSGTSMSCPHISGIVGLLKTLYPSWSPAAIKSAIMTTATTLDNEVEPLLNATDSQATPFSYGAGHVEPNRAMDPGLVYDTTMDDYVNLLCALGYNETQISMFTEDPYQCHKNFSLLNLNYPSITVPNLSGSVTVTRTLKNVGSPATYIAHVQNPNGISISVEPNILKFKKVGEEKSFKVTLKVKQGKATNNCVFGKLIWSDGKHYVRSPIVVKAL	595

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi280g00016	595	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	17	592	IPR045051	-
	Sebi280g00016	595	SUPERFAMILY	Subtilisin-like	17	456	IPR036852	GO:0004252\|GO:0006508
	Sebi280g00016	595	CDD	PA_subtilisin_like	184	314	-	-
	Sebi280g00016	595	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	452	-	-
	Sebi280g00016	595	FunFam	subtilisin-like protease SBT1.5	178	321	-	-
	Sebi280g00016	595	PRINTS	Subtilisin serine protease family (S8) signature	382	398	IPR015500	-
	Sebi280g00016	595	PRINTS	Subtilisin serine protease family (S8) signature	44	57	IPR015500	-
	Sebi280g00016	595	Gene3D	-	178	322	-	-
	Sebi280g00016	595	SUPERFAMILY	PA domain	222	309	IPR046450	-
	Sebi280g00016	595	Gene3D	-	469	595	-	-
	Sebi280g00016	595	Pfam	Subtilase family	40	430	IPR000209	GO:0006508\|GO:0008236
	Sebi280g00016	595	ProSitePatterns	Serine proteases, subtilase family, serine active site.	383	393	IPR023828	-
	Sebi280g00016	595	Pfam	PA domain	229	298	IPR003137	-
	Sebi280g00016	595	FunFam	Subtilisin-like protease SBT1.5	469	595	-	-
	Sebi280g00016	595	Gene3D	Peptidase S8/S53 domain	17	465	IPR036852	GO:0004252\|GO:0006508
	Sebi280g00016	595	Pfam	Fibronectin type-III domain	497	592	IPR041469	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi280g00016	Sebi-Chr280	1013643	1018117	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi280g00016	17	593	Subtilisin-like Serine Gene Family	AT2G04160	65.517	0.0	777

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi280g00016	-		-	gmx:100794807	1027.7