Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi280g00012 ATGTCATGGGACCCTTTGTACAACCACGCCGAGGAAGGTGCTACCAAGAGAAGGAGCAATGCAATGGAGATTCCAAGCCCGAGCTCGAGCCAAAGGATAAGGATACATAAGATAATGATTCTCGTGCTATTACAATTAATACATCTCATTATGAGCCTTTATCTACAGAAAGTGACAATGGTCAATACAACCAACACTTATGGAAGTGGTGGGTGTGTGATATCTCATACTCCTGGAGCTGGAAAAACCTTTCTTGTTATTGCCTTTCTTGTTAGCTACTTAAAGTTATTCCCAGATAAAAAGCCTCTGATCCTTGCTCCAAAAACTACACTTTATACTTGGTACAAGGAATTCATCAAGTGGGAGATTCCTATTACAGTGTATCTAATTCATGGTCGTAAAAACCTGAGAGATTTTGATGAAACACCATTGACTATTCTTGGAGTTCCAAACCCCACCAGTGATGTCAAGCATGTTTTGGATTGCCTTGAAAAGATTAAAAAGTGGCATCTACACCATAGTGTTTTGGTCATGGGGTTTACTTCATTTTTATCACTAACGAGAGAGAATTCAAAATATGAACACAAGAAGTATATGGCTAAAGCATTAAGGGAAAGCACTGGGATCCTTATACTCGATGAAGGGAACAATCCTAGAAGCACCAAGTCAAGGTTGGGGAAAGGGTTGATGAAAGTAGAGACAGAACTGAGAATATTACATTCTGGTACATTGTTTCAAAATAATTTTGGTGAATACTTCAACACACTTTGCTTGGCAAGGCCAAAGTTTGTTCAAGAAGTGCTGAAAGAATTAGATATAAAACAAAAGGGAAATGATAAAAATCCAGAGAAAGCACAACATTTACTTGAGACACGTGCTAGGAAATTCTTCCTAGATGACATTGCTAACAAAATTGACTCAAGTGATGATGAAGTGAGGATGCAGGGTTTGAACATGTTGAGGAAAATCACAAGTGAATGA 981 0.3833 MSWDPLYNHAEEGATKRRSNAMEIPSPSSSQRIRIHKIMILVLLQLIHLIMSLYLQKVTMVNTTNTYGSGGCVISHTPGAGKTFLVIAFLVSYLKLFPDKKPLILAPKTTLYTWYKEFIKWEIPITVYLIHGRKNLRDFDETPLTILGVPNPTSDVKHVLDCLEKIKKWHLHHSVLVMGFTSFLSLTRENSKYEHKKYMAKALRESTGILILDEGNNPRSTKSRLGKGLMKVETELRILHSGTLFQNNFGEYFNTLCLARPKFVQEVLKELDIKQKGNDKNPEKAQHLLETRARKFFLDDIANKIDSSDDEVRMQGLNMLRKITSE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi280g00012 326 Gene3D - 51 302 IPR038718 -
Sebi280g00012 326 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 56 325 IPR044567 GO:0080188
Sebi280g00012 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 264 IPR027417 -
Sebi280g00012 326 Pfam SNF2-related domain 54 272 IPR000330 GO:0005524|GO:0140658
Sebi280g00012 326 SMART ultradead3 35 274 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi280g00012 Sebi-Chr280 744310 745643 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Sebi280g00012 SNF2_N 1.3e-13 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi280g00012 K10875 - qsa:O6P43_013801 400.208