Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi280g00010 ATGGCTAAGGCTTTGAGGGAAAGCACTGGGATCCTCATACTCGATGAAGGGCACAATCTTAGAAGCACCAAGTCAAGGTTGAGGAAAGGGTTGATGAAAGTAGAGACAGAACTGAGAATATTACTTTCTGGTACATTGTTTCAGAATAATTTTGGTGAATACTTCAACACACTTTACTTGGAAAGGCCAAAGTTTGTTCAAGAAGTGCTGAAAGAATTAGATATAAAACAAAAGAAGGGAAATGATAAAAATCCAGAGAAAGCACAACATTTACTTGAGACACGTGCTAGGAAATTCTTTCTAGATGACATTGCTAACAAAATTGACTCAAATGATGATGAAGTGAGGATGGTAGGGTCAAAAGTGAGATTTATTTTGAGCCTTATCTTTCGTGTTGTCAAGGAGGAGAAGGTTCTTATCTTTTGCCGCAACCTTGCACCTATGAAGCTTTTAGTACAATTGTTTGAGGAGTTCTTCAAATGGAAAAAGGATGGAGAAATTTTGTTACTTTATGGGGAACAAGACCTGTTTGAAAGAGGGAAAGTGATTGATAAGTTTGAGGATCCATGTGGAGTTTCAAGAGTGGAATCCATCAAAGATAAAGCAAGTTATTGCAAGGGCTTTTCGTCCTGGCCAGGAAAAGATGGTTTATGTGTATCAACTCTTGGCAAAAGGCTCAATGGAGGAAAATAA 693 0.3795 MAKALRESTGILILDEGHNLRSTKSRLRKGLMKVETELRILLSGTLFQNNFGEYFNTLYLERPKFVQEVLKELDIKQKKGNDKNPEKAQHLLETRARKFFLDDIANKIDSNDDEVRMVGSKVRFILSLIFRVVKEEKVLIFCRNLAPMKLLVQLFEEFFKWKKDGEILLLYGEQDLFERGKVIDKFEDPCGVSRVESIKDKASYCKGFSSWPGKDGLCVSTLGKRLNGGK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi280g00010 230 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 118 195 IPR044567 GO:0080188
Sebi280g00010 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 189 IPR027417 -
Sebi280g00010 230 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 64 IPR014001 -
Sebi280g00010 230 Pfam SNF2-related domain 10 93 IPR000330 GO:0005524|GO:0140658
Sebi280g00010 230 Gene3D - 2 106 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi280g00010 Sebi-Chr280 653072 654148 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Sebi280g00010 SNF2_N 4.6e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi280g00010 K10875 - qsa:O6P43_013801 169.474