Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi280g00001 ATGGTCGATGGTGATACTACTGATTCATCTAACAAGAATATACCATATGCTTCAAATATTGATAAGGAATTAAATACTGAACCTTGTGTTGGAATGACATTTGAGTCTATTGAAAAAGTTAGAGAATTTTATAATTCATTTGCTAAGAAGATGGGTTTTGGAGTACGTGTTCGTTCAACTAAACCAAAGAGAGCAGTCTTGGTTTGTTGCAATGAAGGTCAACACAAAGTGAAAAGCTCTGGAAATGAAGAAATTCAAGATGGCACAAGTCAAACTAAGAAAAAGTGTTCAACTACTCGAAGTGGTTGTGAAGCTTCACTTATTGTTTCAAGAGGCACAACACAAAGTAGTTGGATTATACAATCTTTTAACAATAATCATAACCATGTCATGGTTAGCCCTAAGAGTGTGTCTTATATGAGGTGTCACAAAAAGATGACTAAAGCTGCAAAAAGTCTTGTTGAAAAATTTGAGGAAGAAGGCTTACCGACAGGAAAG 498 0.3494 MVDGDTTDSSNKNIPYASNIDKELNTEPCVGMTFESIEKVREFYNSFAKKMGFGVRVRSTKPKRAVLVCCNEGQHKVKSSGNEEIQDGTSQTKKKCSTTRSGCEASLIVSRGTTQSSWIIQSFNNNHNHVMVSPKSVSYMRCHKKMTKAAKSLVEKFEEEGLPTGK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi280g00001 166 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 163 - -
Sebi280g00001 166 Pfam FAR1 DNA-binding domain 42 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi280g00001 Sebi-Chr280 111769 112266 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi280g00001 FAR1 3.6e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi280g00001 - - tpra:123886791 227.254