Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00149 ATGGGTGATGATTGGCAGATGACCACAGCAATTGCCATAGAGGATGTAAGGAGAGAAGTGAAGATATTGCGTGCTCTAACAGGACATAAGAATCTGGTGCAATTCTATGAAGCCTATGAAGATGATGACAATGGCGTTGTTCACCGTGATCTCAAGCCAGAGGATGAAAATGCCACGTTGAAGGCCATTGATTTTGGATTGTCTGACTATGTAAAGCCAGATGAGAGGTTGAATGATATTGTAGGAAGTGCTTATTATGTAGCTCCAGAAGTTTTGCATAGATCTTATGGGACAGAAGCAGATATGTGGAGCATTGGTGTAATTGCTTATATTCTTTTATGTGGAAGTCGTCCCTTTTGGGCCCGGACAGAATCTGGTATATTTCGGGCGGTCCTGAAGGCAGATCCAAACTTTGATGAAGCTCCTTGGCCTTCTTTATCTGCTGATGCAATAGATTTTGTAAAGAGACTGTTGAATAAGGATTATCGTAAAAGATTAACTGCAGCTCAGGCACTCAGTCATCCATGGTTGGTGAATCATCATGATGATTTGAAGATACCTTTGGATATGATAATCCACAATCTTGTTAAAGCTTACATATGCTCATCTTCTTTACGCAAATCAGCTTTAGGGGCTCTTGCAAAGACATTAACAGTAGCTCAGCTAGCTTATCTCAGAGATCAATTTACTCTGCTAGGACCAAACAAAAATGGATTAATCTCTATGCAGAACTTTAAGACGGCTGTTCTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGAGTCTTAGATTATGTCCATATGGTTAGTTCAATCCAATACAGGAAATTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGTGTTCACCAACTTGAGGGCATGGAGAGCTGGGAGCAACACGCAAGGCGTGCCTATGAGCTTTTTGAAAAGGATGGAAATAGACCAATTATGATTGAAGAGCTTGCCTCGGTTGGTGGTTCTTGA 987 0.4134 MGDDWQMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNGVVHRDLKPEDENATLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPNFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALSHPWLVNHHDDLKIPLDMIIHNLVKAYICSSSLRKSALGALAKTLTVAQLAYLRDQFTLLGPNKNGLISMQNFKTAVLRSSTDASKDSRVLDYVHMVSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARRAYELFEKDGNRPIMIEELASVGGS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00149 328 FunFam - 50 195 - -
Sebi27g00149 328 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 43 - -
Sebi27g00149 328 SMART serkin_6 5 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00149 328 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00149 328 Gene3D Transferase(Phosphotransferase) domain 1 47 185 - -
Sebi27g00149 328 Gene3D Phosphorylase Kinase; domain 1 4 46 - -
Sebi27g00149 328 FunFam CDPK-related kinase 1 215 287 - -
Sebi27g00149 328 Gene3D - 218 287 - -
Sebi27g00149 328 Pfam Protein kinase domain 44 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00149 328 SUPERFAMILY EF-hand 210 324 IPR011992 -
Sebi27g00149 328 Gene3D - 197 325 - -
Sebi27g00149 328 SUPERFAMILY Protein kinase-like (PK-like) 11 193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00149 Sebi-Chr27 2917653 2922385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00149 6 327 EF-hand Containing Proteins AT3G50530 58.128 2.77e-159 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi27g00149 Pkinase 1.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00149 K13412 - gmx:100796678 578.556