Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00138 ATGTGGTCTCAGATATGGATCTTTATGGTTATAGTCTGTGGATACTTTCACCTTATTTGCTCAACAGTAGAATCTTCTTCAGAGGCAGATAAGATCCAAAGTTTGCCAGGCCAACCAGAAGTTAGTTTTCAACAGTTTGGAGGTTACATACCTGTTGATGACAAACATCAGAGAGCTTTGTTTTATTATTTTGTTGAAGCAGAAACAAACCCTGCTTCCAAGCCTCTAATTCTCTGGCTAAATGGAGATAAATCATTTTTCAAAACACTCAATGATGACATCACAGCCCGGGACAATATGGTGTTTCTGCAGAGGTGGCTGGCTAAGTTCCCACAATACAGGAACAATGAATTTTACATAATGGGGGAGAGTTATGCAGGACACTATGTACCACAACTTGCAGAACTCATTGTAAAGAGTAAAGTGAACATCAATCTAAAGGGGATAGCGTTAGGGAATCCTCTTTTGGAGTATGAAACTGATTTCAACTCAGTTGATGAGTTCTATTGGTCACATGGCATGATATCTGATTATGTTTATGAGCTTCGGTCTTCAGTTTGTAACAATTCTAAATCTTCTAGACAAAGCCTAAGAGGCTGTTTCTCTCCAGAATGTATTTCTGTACTTATTCAGATCGATGATGAATACTCTGAGTTAGATTACATTGATCTATATTATGTGATTGGTGATAAATGTCTTTCTTACAATTTATCACAAGCTGCAATTCTCACACACTGGAGAAGGTCAAGCATATCACAAATATCTAGGACTCTAAATATGCAAAAAGATGAAAAAACTCACCAATACCACCAGGAGCTTGATAACTGTCCACTGAAAAATGCAGAGATGTACTTGAACAGAAAAGAGGTGCAGAAGGCTCTCCATGCTCAGCTTGTTGGAGTGAACAATTATCATTTGTGTAGCCCGAGAGAAGATGAAGAAATACCAACAATCAACATTGTGGGCTGGCTCATAAAGTCTGGCCTTAAAGTAATTGTATATAGTGGGGATCAAGATTCTGTTGTTCCATTTATTGGTACTAGAAGATTAGTTGATAAACTAGCTAAGAGACTAGGATTGAAAACAACTGTGCCATACAGTGCTTGGTTTGTTGGAAAACAGGTTGGTGGATGGACACAAGTTTATGGAGATCATGATCTTACCTATGCAACTATTAGAGGGGCTTCACACAGCACCCCAACTACTCAACCAAAGAAATCGTTTGTGTTGTTTGATTCATTTCTTCGTGGGAAACGACTCCCTAAAGCATGA 1272 0.3852 MWSQIWIFMVIVCGYFHLICSTVESSSEADKIQSLPGQPEVSFQQFGGYIPVDDKHQRALFYYFVEAETNPASKPLILWLNGDKSFFKTLNDDITARDNMVFLQRWLAKFPQYRNNEFYIMGESYAGHYVPQLAELIVKSKVNINLKGIALGNPLLEYETDFNSVDEFYWSHGMISDYVYELRSSVCNNSKSSRQSLRGCFSPECISVLIQIDDEYSELDYIDLYYVIGDKCLSYNLSQAAILTHWRRSSISQISRTLNMQKDEKTHQYHQELDNCPLKNAEMYLNRKEVQKALHAQLVGVNNYHLCSPREDEEIPTINIVGWLIKSGLKVIVYSGDQDSVVPFIGTRRLVDKLAKRLGLKTTVPYSAWFVGKQVGGWTQVYGDHDLTYATIRGASHSTPTTQPKKSFVLFDSFLRGKRLPKA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00138 423 Gene3D alpha/beta hydrolase 26 85 IPR029058 -
Sebi27g00138 423 FunFam Carboxypeptidase 317 417 - -
Sebi27g00138 423 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 82 IPR001563 GO:0004185|GO:0006508
Sebi27g00138 423 SUPERFAMILY alpha/beta-Hydrolases 32 420 IPR029058 -
Sebi27g00138 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 131 IPR001563 GO:0004185|GO:0006508
Sebi27g00138 423 PRINTS Carboxypeptidase C serine protease (S10) family signature 387 400 IPR001563 GO:0004185|GO:0006508
Sebi27g00138 423 Pfam Serine carboxypeptidase 37 82 IPR001563 GO:0004185|GO:0006508
Sebi27g00138 423 Pfam Serine carboxypeptidase 89 417 IPR001563 GO:0004185|GO:0006508
Sebi27g00138 423 Gene3D alpha/beta hydrolase 86 422 IPR029058 -
Sebi27g00138 423 ProSitePatterns Serine carboxypeptidases, serine active site. 120 127 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00138 Sebi-Chr27 2687114 2690763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00138 272 420 Calmodulin-binding Proteins AT2G22960 26.974 2.12e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00138 K16297 - gmx:100819443 511.916