Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00134 ATGGCATCCAGCTCAATGTCATCTTCTGGATCATGGAGTGTTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCAAGGGCTGTTGGTGGGAAAACTCCAGAGGAAGTGAAGAGGCACTATGATCTCCTTGTCCAGGACATTAGGCACATTGAGTCAGGGCAAGTGCCATTCCCAAATTACAAGAAAAGTGAAGCTTATGATGAGGAGAAAAGGCTCAAAAACCTGAAGCTCCAGTGA 279 0.4588 MASSSMSSSGSWSVKDNKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYDLLVQDIRHIESGQVPFPNYKKSEAYDEEKRLKNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00134 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Sebi27g00134 92 SMART sant 8 60 IPR001005 -
Sebi27g00134 92 Gene3D - 2 71 - -
Sebi27g00134 92 ProSiteProfiles SANT domain profile. 7 54 IPR017884 -
Sebi27g00134 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Sebi27g00134 92 CDD SANT 18 54 IPR001005 -
Sebi27g00134 92 FunFam Transcription factor SRM1 4 71 - -
Sebi27g00134 92 SUPERFAMILY Homeodomain-like 4 61 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00134 Sebi-Chr27 2642280 2642850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi27g00134 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00134 - - gmx:778061 154.836