Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00122 ATGGCCAGTAATAACAAGGACAACAAGAAAGACCTTGAGTTTCTGGTGAACGAAGATTTCTTCGTAGGTGACAAGTACCTGAGTGAGAGTACTAGCAGTGATGATGATGAGGGAAATCAGCCTCAGTCTTTCTCTTCTCACCAATGGCCTCAAAGTTACAACCCTCAAAATTTTGAATCAATTCTACGAGGACCAAGTTTTCGTCGTTCCAGTTTTGACAATCGTAACTCAGACACAGATGGAAAGGCTCCTTTTCTATCAAGTCAGGAAGATGTTACTACTCAATCAACATGGTGGCAGAAAGGTCCATTGCAAAAGCATTCCACTGTAGAATCGCCCCCTCGTTATGGATGCACCTTCACTCAAACAGTCCTCAATGGCACTCTTATGAGATATTGCTTTGAAAGCAAAGAAGGAATCAGTAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAGATATGGCCGTATTATTGTATCAATCATTTTGTACACTGAACTATATTCAGTTTGTGTGGAATTCATCACCTTGGAAGGAGATAACCTCACTGGTCTGTTTCCTGGAACATCCTTAGATTTGGGAAGTTTCCGGTTGGATTCCATGCACTTGTTTGGAATTTTGGTTGCACTTATCATTCTCCCTACTGTTTGGTTGAGGGATCTTCGAATACTCTCTTATCTATCAGCTGGAGGGATTGTTGCAACACTATTAATTATTACCTGTGTGTTTTGTGTTGGGACAAATGTTGGATTCCATCACACTGGTCAATTTGTAAATTGGAGTGGCATTCCTTTTGCTATTGGGATCTATAGCTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATATACCACTCTATGGCTGACAAAACACAATTTACTAAAGTGTTAATACTATGTTTTGGTTTGTGTATTTTGATATATGGAAGCGTTGCAATCATAGGATTTCTCACGTTTGGTGATGGCACTTTGTCTCAGATAACATTGAATATGCCAGCAGGTGCATTTGCTTCCAAAGTTGCATTGTGGACAACAGTGAGTTTGAGAATTTTTGGATTTGCTAATGCTATTTTAATAGTTTCATTCTAG 1089 0.3939 MASNNKDNKKDLEFLVNEDFFVGDKYLSESTSSDDDEGNQPQSFSSHQWPQSYNPQNFESILRGPSFRRSSFDNRNSDTDGKAPFLSSQEDVTTQSTWWQKGPLQKHSTVESPPRYGCTFTQTVLNGTLMRYCFESKEGISSYPDIGEAAFGRYGRIIVSIILYTELYSVCVEFITLEGDNLTGLFPGTSLDLGSFRLDSMHLFGILVALIILPTVWLRDLRILSYLSAGGIVATLLIITCVFCVGTNVGFHHTGQFVNWSGIPFAIGIYSFCFAGHSVFPNIYHSMADKTQFTKVLILCFGLCILIYGSVAIIGFLTFGDGTLSQITLNMPAGAFASKVALWTTVSLRIFGFANAILIVSF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00122 362 PANTHER OS05G0424000 PROTEIN-RELATED 123 348 - -
Sebi27g00122 362 MobiDBLite consensus disorder prediction 69 89 - -
Sebi27g00122 362 MobiDBLite consensus disorder prediction 33 55 - -
Sebi27g00122 362 Pfam Transmembrane amino acid transporter protein 130 341 IPR013057 -
Sebi27g00122 362 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00122 Sebi-Chr27 2261469 2374431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00122 3 346 Amino Acid or Auxin Permease AAAP Family AT2G41190 49.760 7.09e-124 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00122 K15015 - gmx:100790344 479.174