Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00114 ATGGGGATAGAGATTGTGGAGCCTAACACATGCATCAGGGGTTGCTGCACCAGCTCCTCTATTCCTCTTCATCTCCCTCCTTCCTCTTTTACTCTTCTCTCACCCATTGCCCGAGGGGCTGAGAGTGTTGTTTATGAAGGGACTTTGGATGGTGAGAAGGTTGCGGTGAAGAAACCCATCTTGTCAGTTTCAGAAGACATTAATAAGTTCCATAAAGAATTGCAATTGCTATGCAAGCTAGATCACCCGGGAATAGCAACACTAATTGCTGCCCATGCAAAACCACCCAATTACTTGTTTTTCTTCAAGTTATATGAATCTTCGAATCTCGCACAGAAGTTACATGTGGAAGAATGGGCCCCAACTATCAATCATGCACTTATGATAACAATGCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTTTACATAGAGATGTGAAACCAGCGAATATTCTTCTTGACAAAAATCTTTGTCCGCACCTCACTGATTTTGGTTTGGCCGAATACAAGAATGATATTAAGGGAGTTTCTCTTCAGAATTGGAAGTCTTCTGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCATTTACATGGCACCTGAAATATTAAGAAAGGATTTACACACAGAAAAATCAGACGTGTACAGTTTTGGGGTATCAATCAATGAACTTCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCGGAAGCACAGGCTCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTAACAGCGGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCTGGTGAGGAGTTGGGTATACCCTCAAGATTATTATCAATGATACAGAAGTGCTGGGATGCAAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACAGAGGAAGATAAAGATGGTAGAAGACGTGCATATAAGACCTTGTAACTTGCATGTTGATCAACTTGTGGACAAGACTTACCTTAAGGCTTATCAAGAAAGTATTAGTTGGTCCACTCAAGGTGAACTTTTGGCCAGGAATGCCTCTAGTGCAACTGTTTCTGGTTTGAGAACATGGTCTGAGTCTTATGATGAGCCTTTGGCATACCATCCCATGCTGTCTTGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCCTTCTGCCCCATATTTGCAATGAAAAGGATGTCTATGCTTTTGGTATTTTTGATGGCCACAGAGGTGCAGCAGCTGCTGAGTTTTCCTCTAGAGCTGTACCAGCAGTTTTGCAAACTTTAGGTTTTACGAGCAGTCCTGCTAATGCACTAGTAGAAGCGTTCCTTAGGACAGATGCTGCCTTCAGAAAGGAGCTTGATTCTTTTCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGTTGTACAGCAATTACTGCTCTTGTAGTCAGGAACAAGCTATTTGTTGCTAACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCCATTGCTCTAAGTAAGGATCATGTCGCAAGCTCTCTTCAAGAGAGAGAGCGCGTCACTCGTCATGGGGGCCATGTACATTGGCAAGTTGATACCTGGAGAGTTGGTCTTCCTGCGCTTCAGGTTACTCGATCCATTGGTGATGACGATCTGAAGCCTGCTGTAACTGCAGAGCCTGAGATAACCGAGACTACGTTATGTGAAGAGGATGAATTTCTGGTCATGGCTAGTGATGGCCTCTGGGATGTCATAAGCAGCATGGAGGTCATAAATATAATAAAAGACACTGTTAAAGAGGCTGGAATGTGCTCTAAGAGGTTGGCTACTGAAGCAGTGGAACGTGGCAGCAAAGATAACATCACAGTTATTGTCGTTTTTTTACGTCCTGTATCTACTGCAGAGAGAATTTATTAG 1974 0.4316 MGIEIVEPNTCIRGCCTSSSIPLHLPPSSFTLLSPIARGAESVVYEGTLDGEKVAVKKPILSVSEDINKFHKELQLLCKLDHPGIATLIAAHAKPPNYLFFFKLYESSNLAQKLHVEEWAPTINHALMITMQLAKALQYLHNLGILHRDVKPANILLDKNLCPHLTDFGLAEYKNDIKGVSLQNWKSSGKPTGGFHKKNMVGTLIYMAPEILRKDLHTEKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAGEELGIPSRLLSMIQKCWDANPKSRPSFDDIVKELDFIMEQRKIKMVEDVHIRPCNLHVDQLVDKTYLKAYQESISWSTQGELLARNASSATVSGLRTWSESYDEPLAYHPMLSWGSYATCGRRETMEDTHFLLPHICNEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLGFTSSPANALVEAFLRTDAAFRKELDSFRKSNRCIQKDWHPGCTAITALVVRNKLFVANIGDCRAILCRAGNPIALSKDHVASSLQERERVTRHGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLCEEDEFLVMASDGLWDVISSMEVINIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00114 657 CDD PP2Cc 392 647 IPR001932 -
Sebi27g00114 657 Pfam Protein kinase domain 32 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00114 657 FunFam Protein kinase and PP2C-like domain-containing protein 20 344 - -
Sebi27g00114 657 Gene3D Transferase(Phosphotransferase) domain 1 19 338 - -
Sebi27g00114 657 SMART PP2C_4 380 645 IPR001932 -
Sebi27g00114 657 Gene3D - 383 652 IPR036457 -
Sebi27g00114 657 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 381 651 - -
Sebi27g00114 657 SMART PP2C_SIG_2 405 647 IPR001932 -
Sebi27g00114 657 Pfam Protein phosphatase 2C 395 640 IPR001932 -
Sebi27g00114 657 SMART serkin_6 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00114 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 314 - -
Sebi27g00114 657 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi27g00114 657 SUPERFAMILY PP2C-like 382 649 IPR036457 -
Sebi27g00114 657 ProSiteProfiles PPM-type phosphatase domain profile. 390 647 IPR001932 -
Sebi27g00114 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Sebi27g00114 657 SUPERFAMILY Protein kinase-like (PK-like) 22 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00114 Sebi-Chr27 2103168 2112231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00114 99 657 PP2C-type Phosphatase Gene Family AT2G40860 65.187 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Sebi27g00114 Pkinase 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00114 - - vun:114166829 1164.83