Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00109 ATGGAAAATTTGAGTGAAGAGATTTTTTTTAAACATGATGGAAGACAGGGTAATAGGGTTAATGAGGGTGAAGGTGAAGATGTAAATAACTTGAAATCCCCTGAAGAAGAAAATGCTTGTTCTGGTGAGGCTGTTCCTGATGTGTACAAAAGGATTTCTGAGTTAACTGATGATGAAATTCGAATGCTTGAGTTTGATTCTGAACTGGATGCATATAATTTTTATTGTGAATATGCGAAATTCAAAGGTTTTGCGGTTAGGAAAGATGATGTATATCGTGATCGTAATAGGTTTATTACTATGAGGCAATTGGTCTGTAACAGACAGGGGGAAAGGAGTGAGAAACATTTAAATAGGACGAATTGA 366 0.3552 MENLSEEIFFKHDGRQGNRVNEGEGEDVNNLKSPEEENACSGEAVPDVYKRISELTDDEIRMLEFDSELDAYNFYCEYAKFKGFAVRKDDVYRDRNRFITMRQLVCNRQGERSEKHLNRTN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00109 121 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 117 - -
Sebi27g00109 121 MobiDBLite consensus disorder prediction 12 42 - -
Sebi27g00109 121 MobiDBLite consensus disorder prediction 12 33 - -
Sebi27g00109 121 Pfam FAR1 DNA-binding domain 73 118 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00109 Sebi-Chr27 2054606 2054971 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi27g00109 FAR1 2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00109 - - lja:Lj4g3v0119630.1 97.4413