Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi27g00097 ATGGTTGGTCCTTTTGACAAGGTCTCCGCAATTCATCCTGGGAAAGACTCTTGGAGGTTGAGAGTGAGGGTCGTTCGTTTGTGGGAAATGTGTTCCATTGTTGATCCTACGAATCCTTTTGCCATTGATATGGTTTTGTTGGATGTTGAGGGTGGTAAGATCCAGGCCACAATTCGGAAGCCAATGATGAAGAAGTTTAGGAATGTAATTTCTGAGGGTGAAGTTTACACAATGTTGAATTTTGCTGTTATTAAAAATGTTGGAAGTTACCGTGCCTGTAGACATGAGTTTAAACTTCTGTTTAGTGCAAAGACTAAGGTATTCCCTGCCCAATCTGATGTGATACCTACTGTGGGTTTATCTCTTATGACCACTGAGCAGATTGCAAAGACCAATGGAGAGTCAAATTACTTATTTGACCTGATGGGTATACTGACAGTTGTTTCTGCTGAGAAAGTTGTTGAAACTGATGGGAGGAAAACTAGAATGATGGAAATGGAGCTGATGGATGACAAGGGTAGAATGAGGTGCACAGTTTTTGGGCACTATGTGGACACATTGAAAGCTTTTGTTGAATCAGGTGTTACCCCGTTACCTGTCGTTGTTGTTCAACTTTTCAAAGTCAGATTGTATAAGGGTAATGTTGTGCTTCAGAATGTTAATAATACTTCAAGGATTATGTGGAATCCTGATACTCCTGATGCCAATGAGTTTAGGAATGGGAAGGTCAATGGTGGTATGGAGCTTGCAAGTGTCACAAATCAGTGA 768 0.4089 MVGPFDKVSAIHPGKDSWRLRVRVVRLWEMCSIVDPTNPFAIDMVLLDVEGGKIQATIRKPMMKKFRNVISEGEVYTMLNFAVIKNVGSYRACRHEFKLLFSAKTKVFPAQSDVIPTVGLSLMTTEQIAKTNGESNYLFDLMGILTVVSAEKVVETDGRKTRMMEMELMDDKGRMRCTVFGHYVDTLKAFVESGVTPLPVVVVQLFKVRLYKGNVVLQNVNNTSRIMWNPDTPDANEFRNGKVNGGMELASVTNQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi27g00097 255 PANTHER OS03G0429900 PROTEIN 8 240 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sebi27g00097 255 Gene3D - 4 109 IPR012340 -
Sebi27g00097 255 CDD RPA1_DBD_B_like 140 239 - -
Sebi27g00097 255 Gene3D - 114 248 IPR012340 -
Sebi27g00097 255 CDD RPA1_DBD_A_like 19 107 - -
Sebi27g00097 255 Pfam Domain of unknown function DUF223 44 113 IPR003871 -
Sebi27g00097 255 SUPERFAMILY Nucleic acid-binding proteins 121 240 IPR012340 -
Sebi27g00097 255 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi27g00097 Sebi-Chr27 1936299 1938010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi27g00097 8 253 Core DNA Replication Machinery Family AT2G06510 22.957 1.39e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi27g00097 - - lja:Lj0g3v0341019.1 229.565